G1198037


Basic Information

Item Value
gene id G1198037
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 66409301 ~ 66411467 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1367434
CATGTTTTATTTGACTACATTAAACATTAACATACGACACAAAGGATGTATTCATCATAACTGGACCAGTTTGCCCCATTCTGTGTATTATTCAGTAATATATACATAAAAGGTGGGAAACCAAAGTCAATCTAGCCCAGTCTTCTGCTATGCAAATCATTACAGAGTTTAAGACTAAAGTATATGGAATGGAATGGGCAATTCATTAACGCATATATTTGTACACTGCATGTTTTGCATTAGATATATTAGACATCAGCAAACAACAAGAAAGGGAAATACATGTTGATAATGTTTATAATGTAGCACAGTTTTGTCCAGGCAATTCTGTTATCTAGCATTATCAGGGTTGGGTGAATGAGCCCCTTTACATACGTCTCATTCTCAACTGACTAGAGAGAGTGTTTTGCCTGAGAACTAAGTCAGCACTAGCACTGTCCATAGAACTGTCTttagcactgtccctagaactgcccctagcactgtccctagaactgtccctagcactgtccctagaactgcccctagaactgtccctagcactgtccctagaactgtccctagaactgtcaccagcactgtccctagaactgtcactagcactgtccctatatagcactgtcactagcactgtccctatatagcactgtcactagcactgtccctatatagcactgtcactagcactgtaactatatagcactgtcactagtactgtaactatatagcactTTCCATATAtagcactgtaactatatagcactgtcactagcactgtaactatatagaactgtccctatatagcactgtcactagcactgtccctatatagcactgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1367434 True 839 lncRNA 0.41 3 66409301 66411467

Neighbor

gene id symbol gene type direction distance location
LOC118938102 LOC106603753 coding downstream 23378 66225150 ~ 66385923 (-)
LOC118938101 LOC106603827 coding downstream 186395 66220065 ~ 66267701 (-)
LOC118938357 LOC106595583 coding downstream 905909 65487948 ~ 65503404 (-)
LOC118936529 LOC105012854 coding downstream 1363840 64969176 ~ 65045461 (-)
LOC110487107 LOC106606311 coding downstream 1445478 64952654 ~ 64963823 (-)
LOC118938480 NA coding upstream 12130 66423597 ~ 66424229 (-)
LOC118938476 LOC106603753 coding upstream 22922 66434389 ~ 66435647 (-)
LOC110519882 LOC106603827 coding upstream 265864 66677331 ~ 66679483 (-)
LOC118938475 LOC106603827 coding upstream 340325 66751792 ~ 66775949 (-)
LOC110513226 LOC106606280 coding upstream 375979 66787446 ~ 66789545 (-)
G1198035 NA non-coding downstream 8225 66400340 ~ 66401076 (-)
G1198034 NA non-coding downstream 10845 66393457 ~ 66398456 (-)
G1198033 NA non-coding downstream 19655 66389254 ~ 66389646 (-)
G1198031 NA non-coding downstream 39531 66369112 ~ 66369770 (-)
G1198021 NA non-coding downstream 53717 66354620 ~ 66355584 (-)
G1198042 NA non-coding upstream 5262 66416729 ~ 66493975 (-)
G1197896 LOC106577477 non-coding upstream 17216 66428683 ~ 66429311 (-)
G1198044 NA non-coding upstream 18914 66430381 ~ 66431263 (-)
G1198045 NA non-coding upstream 26498 66437965 ~ 66438844 (-)
G1197992 NA non-coding upstream 35296 66446763 ~ 66447840 (-)
G1197903 LOC106603827 other downstream 35150 66368056 ~ 66374151 (-)
G1196890 NA other downstream 356234 66052650 ~ 66053067 (-)
G1196805 NA other downstream 523696 65880226 ~ 65920222 (-)
G1196818 NA other downstream 549929 65857818 ~ 65859372 (-)
G1196797 NA other downstream 613866 65790723 ~ 65795435 (-)
G1198140 NA other upstream 382356 66793823 ~ 66852622 (-)
G1198179 NA other upstream 519022 66930489 ~ 66936294 (-)
LOC118938487 LOC106581592 other upstream 601523 66997539 ~ 67015258 (-)
G1198220 NA other upstream 679276 67090743 ~ 67092643 (-)
LOC110512204 LOC106592354 other upstream 760272 67167944 ~ 67175825 (-)

Expression

G1198037 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
End of interactive chart.

G1198037 Expression in each Bioproject

Bar chart with 17 bars.
G1198037 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
End of interactive chart.

Co-expression Network