G1198083


Basic Information

Item Value
gene id G1198083
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 66596609 ~ 66597181 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1367501
cacagtggaggtgtcataatacccataacacctagcggtcaaacagggaaatgtttccaatagttttatagagccccacagtggaggtgtcataatacccataacacctagcggtcaaacagggaaatggttccaatagttttatagagccccacagtggaggtgtcataatacccataacacctagcggtcaaacagggaaatggttccaatagttttatagagccccacagtggaggtgtcataatacccataacacctagcggtcaaacagggaaatggttccaatagttttatagagccgcACAGTgaaggtgtcataatacccataacacctagcggtca
>TU1367502
cacagtggaggtgtcataatacccataacacctagcggtcaaacagggaaatgtttccaatagttttatagagccccacagtggaggtgtcataatacccataacacctagcggtcaaacagggaaatggttccaatagttttatagagccccacagtggaggtgtcataatacccataacacctagcggtcaaacagggaaatggttccaatagttttatagagccgcACAGTgaaggtgtcataatacccataacacctagcggtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1367501 False 345 lncRNA 0.45 2 66596609 66597181
TU1367502 True 269 lncRNA 0.45 2 66596609 66597181

Neighbor

gene id symbol gene type direction distance location
LOC118938476 LOC106603753 coding downstream 160962 66434389 ~ 66435647 (-)
LOC118938480 NA coding downstream 172380 66423597 ~ 66424229 (-)
LOC118938102 LOC106603753 coding downstream 210686 66225150 ~ 66385923 (-)
LOC118938101 LOC106603827 coding downstream 373703 66220065 ~ 66267701 (-)
LOC118938357 LOC106595583 coding downstream 1093217 65487948 ~ 65503404 (-)
LOC110519882 LOC106603827 coding upstream 80150 66677331 ~ 66679483 (-)
LOC118938475 LOC106603827 coding upstream 154611 66751792 ~ 66775949 (-)
LOC110513226 LOC106606280 coding upstream 190265 66787446 ~ 66789545 (-)
LOC118938487 LOC106581592 coding upstream 400358 66997539 ~ 67015258 (-)
LOC118938482 LOC106603827 coding upstream 567586 67164767 ~ 67166137 (-)
G1198077 NA non-coding downstream 23203 66572693 ~ 66573406 (-)
G1198011 NA non-coding downstream 33721 66558487 ~ 66562888 (-)
G1198059 NA non-coding downstream 40564 66473446 ~ 66556045 (-)
G1198058 NA non-coding downstream 44273 66468448 ~ 66552336 (-)
G1198057 NA non-coding downstream 45186 66466948 ~ 66551423 (-)
G1198085 NA non-coding upstream 11785 66608966 ~ 66609278 (-)
G1198089 NA non-coding upstream 19820 66617001 ~ 66638276 (-)
G1198093 NA non-coding upstream 34512 66631693 ~ 66632520 (-)
G1198097 NA non-coding upstream 47423 66644604 ~ 66644934 (-)
G1198103 NA non-coding upstream 83346 66680527 ~ 66687855 (-)
G1197903 LOC106603827 other downstream 222458 66368056 ~ 66374151 (-)
G1196890 NA other downstream 543542 66052650 ~ 66053067 (-)
G1196805 NA other downstream 711004 65880226 ~ 65920222 (-)
G1196818 NA other downstream 737237 65857818 ~ 65859372 (-)
G1196797 NA other downstream 801174 65790723 ~ 65795435 (-)
G1198140 NA other upstream 196642 66793823 ~ 66852622 (-)
G1198179 NA other upstream 333308 66930489 ~ 66936294 (-)
G1198220 NA other upstream 493562 67090743 ~ 67092643 (-)
LOC110512204 LOC106592354 other upstream 574558 67167944 ~ 67175825 (-)

Expression

G1198083 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

G1198083 Expression in each Bioproject

Bar chart with 18 bars.
G1198083 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
End of interactive chart.

Co-expression Network