Gene
RNA
| Item | Value |
|---|---|
| gene id | G1199089 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 69064732 ~ 69065567 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hepatocyte growth factor-regulated tyrosine kinase substrate-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1368925 | True | 596 | lncRNA | 0.54 | 2 | 69064732 | 69065567 |
69,062,800
69,063,200
69,063,600
69,064,000
69,064,400
69,064,800
69,065,200
69,065,600
69,066,000
69,066,400
69,066,800
69,067,200
69,067,600
69,068,000
69,068,400
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538856 | LOC106606365 | coding | downstream | 75511 | 68976136 ~ 68989221 (-) |
| LOC110538842 | LOC105006167 | coding | downstream | 127519 | 68865363 ~ 68937213 (-) |
| kt3k | LOC106601911 | coding | downstream | 203288 | 68856782 ~ 68861444 (-) |
| LOC110512740 | tbcd | coding | downstream | 208675 | 68714189 ~ 68856057 (-) |
| LOC110487472 | LOC106592355 | coding | downstream | 734122 | 68329135 ~ 68330610 (-) |
| zgc:103625 | LOC106606248 | coding | upstream | 25887 | 69091435 ~ 69098854 (-) |
| LOC118938362 | LOC106602015 | coding | upstream | 469781 | 69535348 ~ 69538421 (-) |
| LOC110518542 | LOC105006040 | coding | upstream | 472970 | 69538537 ~ 69671764 (-) |
| LOC110487134 | smim22 | coding | upstream | 758529 | 69823493 ~ 69828631 (-) |
| LOC118938364 | LOC105012791 | coding | upstream | 813117 | 69878684 ~ 69909395 (-) |
| G1199079 | NA | non-coding | downstream | 22307 | 69041949 ~ 69042425 (-) |
| G1199078 | LOC106606318 | non-coding | downstream | 23352 | 69040291 ~ 69041380 (-) |
| G1199071 | NA | non-coding | downstream | 34529 | 69028701 ~ 69030203 (-) |
| G1199067 | NA | non-coding | downstream | 41224 | 69022744 ~ 69023508 (-) |
| G1199061 | NA | non-coding | downstream | 49414 | 69014609 ~ 69015318 (-) |
| G1199095 | hgs | non-coding | upstream | 6151 | 69071718 ~ 69077960 (-) |
| G1199105 | NA | non-coding | upstream | 34547 | 69100114 ~ 69100335 (-) |
| G1199131 | NA | non-coding | upstream | 74324 | 69139891 ~ 69140240 (-) |
| G1199132 | NA | non-coding | upstream | 81680 | 69147247 ~ 69149879 (-) |
| G1199087 | NA | other | downstream | 1855 | 69060096 ~ 69062877 (-) |
| G1199049 | NA | other | downstream | 70304 | 68993691 ~ 68994428 (-) |
| G1199170 | NA | other | upstream | 204439 | 69270006 ~ 69275774 (-) |
| G1199205 | NA | other | upstream | 286914 | 69352481 ~ 69353948 (-) |
| G1199212 | NA | other | upstream | 298100 | 69363667 ~ 69366223 (-) |
| G1199912 | LOC105012792 | other | upstream | 859302 | 69924869 ~ 69925550 (-) |
