Item | Value |
---|---|
gene id | LOC110488557 |
gene name | NA |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048578.1 |
NCBI id | CM023232.3 |
chromosome length | 43310081 |
location | 3319730 ~ 3332672 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005035895.1 | False | 6382 | mRNA | 0.44 | 4 | 3319730 | 3332670 |
XR_002468436.2 | False | 4273 | mRNA | 0.45 | 3 | 3322059 | 3332662 |
XR_005035894.1 | True | 3871 | mRNA | 0.45 | 4 | 3322059 | 3332672 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110488554 | LOC106604953 | coding | downstream | 32450 | 3277067 ~ 3287280 (-) |
LOC110489459 | NA | coding | downstream | 577666 | 2740229 ~ 2742064 (-) |
LOC110488549 | lonrf3 | coding | downstream | 600944 | 2707872 ~ 2718786 (-) |
LOC110487696 | ids | coding | downstream | 712309 | 2599880 ~ 2607421 (-) |
LOC118938747 | ids | coding | downstream | 727653 | 2584539 ~ 2592077 (-) |
LOC118938689 | NA | coding | upstream | 10985 | 3343657 ~ 3347990 (-) |
LOC110488559 | NA | coding | upstream | 47262 | 3379934 ~ 3381683 (-) |
LOC110488563 | NA | coding | upstream | 121128 | 3453800 ~ 3456246 (-) |
csnk1a1 | csnk1a1 | coding | upstream | 167071 | 3499743 ~ 3534755 (-) |
LOC110488567 | LOC106604943 | coding | upstream | 215914 | 3548586 ~ 3553025 (-) |
G1206206 | NA | non-coding | downstream | 37 | 3318704 ~ 3319693 (-) |
G1206205 | NA | non-coding | downstream | 1751 | 3310434 ~ 3317979 (-) |
G1206120 | NA | non-coding | downstream | 147101 | 3154886 ~ 3172629 (-) |
G1206116 | LOC106604955 | non-coding | downstream | 167894 | 3148625 ~ 3151836 (-) |
G1206072 | NA | non-coding | downstream | 232362 | 3086900 ~ 3087368 (-) |
G1206235 | LOC106604950 | non-coding | upstream | 41453 | 3374125 ~ 3375870 (-) |
G1206247 | NA | non-coding | upstream | 54735 | 3387407 ~ 3388412 (-) |
G1206268 | LOC106604946 | non-coding | upstream | 91809 | 3424481 ~ 3425461 (-) |
G1206272 | NA | non-coding | upstream | 97247 | 3429919 ~ 3430150 (-) |
G1206276 | NA | non-coding | upstream | 107432 | 3440104 ~ 3440335 (-) |
G1205223 | LOC100136420 | other | downstream | 658747 | 2613992 ~ 2660983 (-) |
G1205002 | NA | other | downstream | 810318 | 2508911 ~ 2509412 (-) |
G1202426 | NA | other | downstream | 2715200 | 603006 ~ 604530 (-) |
G1206283 | LOC106604946 | other | upstream | 116409 | 3449081 ~ 3451129 (-) |
G1206291 | fbxo38 | other | upstream | 134391 | 3467063 ~ 3467669 (-) |
G1206357 | LOC106604937 | other | upstream | 278131 | 3610803 ~ 3612293 (-) |
LOC110488575 | LOC106604935 | other | upstream | 395823 | 3728495 ~ 3733973 (-) |
G1206939 | LOC100136477 | other | upstream | 892367 | 4225039 ~ 4225969 (-) |