LOC110488588


Basic Information

Item Value
gene id LOC110488588
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 4730739 ~ 4739245 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002468449.2
TGTTGCCGGAAAACTGTAGCCTAAGCTACCTCCAGTGACACAACCTCCATCTGCTTGTACATGCAGATCGGCTTACATTCGATTTTATTTTGATtgttcaggttcaccatcagCAATCGTTTTGGTAGTTTTGCTTTAAACAATCAGTGTTTGTGGTCATTTTAAGATATACAGGGTACAGATGATACAGATATTTATTCCAGTAAGTTGTGACATAAGGAATGGATACAATATCCCTTTGAAATAAAGCACGTACAGACCTGTTGTCCTGATGGAGCAAGGAGAATCCCATTGTTCCTATTGGAGAGTCAACTGGATTAAGGAGGGTAGGTCAAGAAGCTCCCTGACACCACTGCCACCGCCAGGCAGTCACCGATGAAGGGGCTCATGGGGAGATACGATACAGAAAAGCACCCTGGGAAAAAAAAGAAGATCCAAATCAAAAAAAGAACTCTCAGCAGTTTGGGAGAAACTTTggggaaagaaaagagaatgGAGATTGTCATATGACCCGGAGGGGTGTACGGCGGTAGCTCTGAATCTAATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002468449.2 True 547 mRNA 0.43 3 4730739 4739245

Neighbor

gene id symbol gene type direction distance location
LOC110488586 LOC106604927 coding upstream 86792 4636594 ~ 4643947 (+)
LOC110488581 LOC106611927 coding upstream 253129 4327546 ~ 4477610 (+)
LOC110488584 NA coding upstream 359369 4370172 ~ 4371370 (+)
LOC110489462 NA coding upstream 441970 4285610 ~ 4288769 (+)
LOC110488580 slc26a2 coding upstream 460010 4255881 ~ 4270729 (+)
phykpl LOC100286425 coding downstream 198058 4937303 ~ 4965435 (+)
LOC110488601 NA coding downstream 477126 5216371 ~ 5220040 (+)
LOC110488602 NA coding downstream 488782 5228027 ~ 5232654 (+)
LOC110488605 LOC106604911 coding downstream 659165 5398410 ~ 5402791 (+)
LOC110488611 LOC106604836 coding downstream 1260855 6000100 ~ 6003751 (+)
G1207439 NA non-coding upstream 2390 4728022 ~ 4728349 (+)
G1207395 NA non-coding upstream 37993 4690059 ~ 4692746 (+)
G1207403 NA non-coding upstream 65763 4664378 ~ 4664976 (+)
G1207315 NA non-coding upstream 89651 4639927 ~ 4641088 (+)
G1207387 NA non-coding upstream 101258 4628783 ~ 4629481 (+)
G1207445 NA non-coding downstream 1643 4740888 ~ 4741107 (+)
G1207465 NA non-coding downstream 19987 4759232 ~ 4781780 (+)
G1207493 NA non-coding downstream 58323 4797568 ~ 4797821 (+)
G1207496 NA non-coding downstream 61559 4800804 ~ 4801020 (+)
G1207502 NA non-coding downstream 70378 4809623 ~ 4850656 (+)
G1205631 LOC106611372 other upstream 1555509 3174502 ~ 3175230 (+)
LOC110488551 LOC106604955 other upstream 1578006 2837214 ~ 3160873 (+)
G1202826 NA other upstream 3789565 940502 ~ 941174 (+)
si:ch211-255i20.3 LOC106604974 other upstream 3970045 750392 ~ 760694 (+)
G1207553 NA other downstream 182896 4922141 ~ 4922560 (+)
G1208884 NA other downstream 1164676 5903921 ~ 5907769 (+)
G1209615 LOC106604863 other downstream 2004689 6743934 ~ 6744790 (+)
G1209622 NA other downstream 2012107 6751352 ~ 6751714 (+)
G1209572 NA other downstream 2013712 6752864 ~ 6756811 (+)

Expression


Co-expression Network