Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110488614 |
| gene name | LOC106604892 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 6145809 ~ 6150743 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ADP-ribosylation factor-like protein 3 |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036942742.1 | True | 1293 | mRNA | 0.44 | 6 | 6145809 | 6150743 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488611 | LOC106604836 | coding | upstream | 142058 | 6000100 ~ 6003751 (+) |
| LOC110488605 | LOC106604911 | coding | upstream | 743018 | 5398410 ~ 5402791 (+) |
| LOC110488602 | NA | coding | upstream | 913155 | 5228027 ~ 5232654 (+) |
| LOC110488601 | NA | coding | upstream | 925769 | 5216371 ~ 5220040 (+) |
| phykpl | LOC100286425 | coding | upstream | 1194458 | 4937303 ~ 4965435 (+) |
| LOC110488618 | LOC106604841 | coding | downstream | 16488 | 6167231 ~ 6175289 (+) |
| LOC110488619 | LOC106604842 | coding | downstream | 47281 | 6198024 ~ 6291026 (+) |
| LOC100136156 | LOC100136156 | coding | downstream | 143458 | 6294201 ~ 6298860 (+) |
| LOC110488624 | LOC106604895 | coding | downstream | 263388 | 6414131 ~ 6419690 (+) |
| LOC110488626 | LOC106604896 | coding | downstream | 281278 | 6432021 ~ 6440952 (+) |
| G1209127 | NA | non-coding | upstream | 1502 | 6144074 ~ 6144307 (+) |
| G1209125 | NA | non-coding | upstream | 4330 | 6140691 ~ 6141479 (+) |
| G1209089 | NA | non-coding | upstream | 64951 | 6080557 ~ 6080858 (+) |
| G1209085 | NA | non-coding | upstream | 70025 | 6075548 ~ 6075784 (+) |
| G1209025 | NA | non-coding | upstream | 117890 | 6027609 ~ 6027919 (+) |
| G1209133 | NA | non-coding | downstream | 1512 | 6152255 ~ 6152959 (+) |
| G1209137 | NA | non-coding | downstream | 12580 | 6163323 ~ 6164399 (+) |
| G1209219 | LOC106604845 | non-coding | downstream | 156746 | 6307489 ~ 6307824 (+) |
| G1209367 | NA | non-coding | downstream | 164274 | 6315017 ~ 6315255 (+) |
| G1209373 | NA | non-coding | downstream | 171835 | 6322578 ~ 6324818 (+) |
| G1208884 | NA | other | upstream | 238040 | 5903921 ~ 5907769 (+) |
| G1207553 | NA | other | upstream | 1223249 | 4922141 ~ 4922560 (+) |
| LOC110488581 | LOC106611927 | other | upstream | 1751769 | 4327546 ~ 4477610 (+) |
| G1205631 | LOC106611372 | other | upstream | 2970579 | 3174502 ~ 3175230 (+) |
| LOC110488551 | LOC106604955 | other | upstream | 2993076 | 2837214 ~ 3160873 (+) |
| G1209615 | LOC106604863 | other | downstream | 593191 | 6743934 ~ 6744790 (+) |
| G1209622 | NA | other | downstream | 600609 | 6751352 ~ 6751714 (+) |
| G1209572 | NA | other | downstream | 602214 | 6752864 ~ 6756811 (+) |
| LOC110488661 | diaph1 | other | downstream | 1168277 | 7251365 ~ 7385487 (+) |
| G1210502 | NA | other | downstream | 1281634 | 7432377 ~ 7435168 (+) |
