LOC110488659


Basic Information

Item Value
gene id LOC110488659
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 7247779 ~ 7249658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036942770.1
AGACGTCACATGACACGCTTGACTTTAACTCGTCCCTGTCCAATGGCATCTCTTAACCAACCCCGAGCCCGTCCAGCgttcgccctctccctctcttggtAACCAATCTATCCTCTCCCCACAAAACACAAACCGAGGCAGGGAGGAAGCTGTATAGCCTACGacctggagagatagagagagcgctACCGGAGAGGAGACGGATCTCTGAACCCTCTATCAAttgtctctctccccaccccactCTTCGGGTCTGGATCGATATTCCCGTCGGGGGATCGGTTGGAGTTGAAGGCACTGAAAACCGATACTTGTCGACCTTTCCTGGATATAAGAACGTGCGCGAGGAGGAACCGGCGGTGAACCAGTGTACCCTTGTCTACCCTTTCTCGGCCCGCGCTCTACCCGATAAATCCACTTGTTACAGCGCGCTTTAAGAACCCACTTGGACCAGCCAGACGAGATAAATTGCGTGCTTGTAAGGATGGTCTTATGAAACTTTACCAACTAGGCTATACCAAGTAGCACCATTTAGCGACATTACGTTAACTTTACAGTCCAGATAGGCCAGGTGTTTACGGTAAGAAATCTCAACGAAGAAATCCGAGTATTCAAATCGCTAGTTCCGTCCTCATGATCTCGACATTATACAGCCGGAGAAGCTCTTGGCGGTTTACGTCACTGGTAACGAGTCTAGACAACCTCTGGTGATTTTTAGTGACTTCGACATATCAGGATATACGAATTCAGTTCTGCGGCTAAATTAGTGACTCAAGGACATATGGTCTGTAGGCGCAGGGGATTTAGTGCCAAAACAACACCGCCTCTCCAGAGCGCGTTCTCCCCGGGAGAGATTGGACAGAGCGGTCAGAGTCTGAGGAATGCGGGCACTGTTTCCCTGGATCTCCACCTCACCTGCGGAGACTCCGCTGCACACACCAAATTGAACGTTGACCGGGTGACGCAAGCGGTCATGTTGAGGCAAATCCTGCTGAATTCCACCAACGCACCGGACTTCGACTTAGGGTTGGCCCATCAGACGCACGCGTCTGGGTCCGTGAACGCATCCAACGGCTCGGTGAGCATGGCGGGCCTGCTCAGGCCCACGGATAACAGGGGAGGACTGCGGGAGGGAGGAGAGCTGAACAAACCAGACCTGGCAACCTACGTGGTGATCTGTCTGGTTCTGTTTCTGCTCGTGCTGCTCATCGTCTTCTTCATCAACTGTCAGCTGAGGACCTCCTTTTTCGCCTCCATGCCCTACGATAGGTCTCTCAGAGAGGCCCGGACATCCTACAAGTAGAACCCGTTACCCCATCGGGTGGTAACGTTTGTACCAGGACTGGGTAACTTGTGTTATCGAATGTAGTCATGGAGGAATTTAAGATTTTTGCCAACTGCATGGTCCAAACGCTGTGCGTAACCGTTAAGTGTTAATTTGGCACAATGAGAGAGGCCTATTACGCACCATGTTCCAAACTGGACTAATGTCATTATGTGCATAtaaatgtttgtttgtgtatatACAACATTTTGTATAACTGCACTGTAATGAATTTGCGCTATTATGTAGGCCTGTTGTGTAATTCTGCCGCTTAAAGATTCATTCCTTGTCCTGTGTAAAACCATGATTAAATCTATGATAAATATAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC104961544 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036942770.1 True 1652 mRNA 0.50 2 7247779 7249658

Neighbor

gene id symbol gene type direction distance location
LOC110488658 LOC106604872 coding upstream 20023 7175176 ~ 7228229 (+)
LOC118938692 LOC106611811 coding upstream 161063 7083183 ~ 7087463 (+)
LOC110488657 LOC106604826 coding upstream 165786 6940410 ~ 7081993 (+)
dock2 LOC106604826 coding upstream 309869 6933060 ~ 6937910 (+)
LOC110488650 LOC106611908 coding upstream 361254 6845220 ~ 6886525 (+)
LOC110488661 diaph1 coding downstream 1707 7251365 ~ 7385487 (+)
LOC118938693 NA coding downstream 206224 7455882 ~ 7459050 (+)
fgf18a LOC106604790 coding downstream 727092 7976750 ~ 7986393 (+)
LOC110488706 NA coding downstream 1075643 8325301 ~ 8335960 (+)
LOC110488707 apbb2 coding downstream 1090547 8340205 ~ 8393946 (+)
G1210338 NA non-coding upstream 2506 7245062 ~ 7245273 (+)
G1210049 NA non-coding upstream 213961 7000733 ~ 7033818 (+)
G1210496 NA non-coding downstream 166101 7415759 ~ 7417025 (+)
G1210497 NA non-coding downstream 167420 7417078 ~ 7417464 (+)
G1210501 NA non-coding downstream 174910 7424568 ~ 7424923 (+)
G1210520 LOC106604879 non-coding downstream 210190 7459848 ~ 7481225 (+)
G1209572 NA other upstream 490968 6752864 ~ 6756811 (+)
G1209622 NA other upstream 496065 6751352 ~ 6751714 (+)
G1209615 LOC106604863 other upstream 502989 6743934 ~ 6744790 (+)
G1208884 NA other upstream 1340010 5903921 ~ 5907769 (+)
G1207553 NA other upstream 2325219 4922141 ~ 4922560 (+)
G1210502 NA other downstream 182719 7432377 ~ 7435168 (+)
G1210695 NA other downstream 561473 7811131 ~ 7811872 (+)
G1210708 LOC106604831 other downstream 579165 7828823 ~ 7836843 (+)

Expression


Co-expression Network