Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110487721 |
| gene name | nsun7 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 8394445 ~ 8432741 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| nsun7 | Predicted to enable RNA binding activity and methyltransferase activity. Predicted to be involved in methylation. Predicted to act upstream of or within flagellated sperm motility and sperm mitochondrion organization. |
| description |
|---|
| putative methyltransferase NSUN7 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036942856.1 | False | 3579 | mRNA | 0.53 | 12 | 8394445 | 8432741 |
| XM_036942855.1 | True | 3696 | mRNA | 0.53 | 13 | 8394447 | 8432739 |
8,392,000
8,396,000
8,400,000
8,404,000
8,408,000
8,412,000
8,416,000
8,420,000
8,424,000
8,428,000
8,432,000
8,432,000
8,436,000
8,440,000
8,444,000
8,448,000
8,452,000
8,456,000
8,460,000
8,464,000
8,468,000
8,472,000
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| bicc2 | LOC106604787 | coding | downstream | 68305 | 8308078 ~ 8326140 (-) |
| LOC110487720 | LOC106604788 | coding | downstream | 88697 | 8028872 ~ 8305748 (-) |
| LOC110488703 | LOC100194717 | coding | downstream | 374597 | 8010934 ~ 8019848 (-) |
| fbxw11a | LOC106604789 | coding | downstream | 384144 | 7989799 ~ 8010301 (-) |
| si:ch73-233f7.1 | LOC106604791 | coding | downstream | 462303 | 7924328 ~ 7932142 (-) |
| chrna9 | LOC100136255 | coding | upstream | 9266 | 8442007 ~ 8447403 (-) |
| LOC110488709 | LOC105026169 | coding | upstream | 25762 | 8458503 ~ 8472134 (-) |
| LOC110488710 | klb | coding | upstream | 50965 | 8483706 ~ 8491718 (-) |
| LOC110518941 | frmpd1 | coding | upstream | 79255 | 8511996 ~ 8562493 (-) |
| LOC110488715 | grhpr | coding | upstream | 137750 | 8570491 ~ 8578404 (-) |
| G1211985 | NA | non-coding | downstream | 76490 | 8317746 ~ 8317955 (-) |
| G1211961 | NA | non-coding | downstream | 113645 | 8275898 ~ 8280800 (-) |
| G1211861 | NA | non-coding | downstream | 240326 | 8152330 ~ 8154119 (-) |
| G1211823 | NA | non-coding | downstream | 316752 | 8072365 ~ 8077693 (-) |
| G1212066 | NA | non-coding | upstream | 61487 | 8494228 ~ 8494467 (-) |
| G1212029 | NA | non-coding | upstream | 76202 | 8508943 ~ 8510637 (-) |
| G1212069 | NA | non-coding | upstream | 95729 | 8528470 ~ 8535147 (-) |
| G1212191 | NA | non-coding | upstream | 322439 | 8755180 ~ 8755469 (-) |
| G1212192 | NA | non-coding | upstream | 325428 | 8758169 ~ 8758375 (-) |
| LOC110488691 | NA | other | downstream | 518134 | 7664270 ~ 7877610 (-) |
| G1211559 | LOC106611856 | other | downstream | 1028712 | 7364297 ~ 7365733 (-) |
| G1209763 | NA | other | downstream | 1878509 | 6514211 ~ 6515936 (-) |
| G1209275 | LOC106604892 | other | downstream | 2243784 | 6145946 ~ 6150661 (-) |
| G1212070 | NA | other | upstream | 97988 | 8530729 ~ 8533635 (-) |
| G1212202 | NA | other | upstream | 399710 | 8832451 ~ 8832824 (-) |
| G1212205 | NA | other | upstream | 404047 | 8836788 ~ 8837168 (-) |
| bcorl1 | LOC106604760 | other | upstream | 432252 | 8859834 ~ 8900886 (-) |
