Item | Value |
---|---|
gene id | LOC110488746 |
gene name | LOC106604746 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048578.1 |
NCBI id | CM023232.3 |
chromosome length | 43310081 |
location | 9441509 ~ 9475071 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: rho guanine nucleotide exchange factor 6-like isoform X3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036942893.1 | False | 4525 | mRNA | 0.48 | 22 | 9443462 | 9473782 |
XM_036942892.1 | False | 4609 | mRNA | 0.48 | 22 | 9443462 | 9473944 |
XM_021561083.2 | False | 4698 | mRNA | 0.48 | 21 | 9443462 | 9475071 |
XM_036942891.1 | False | 4719 | mRNA | 0.48 | 22 | 9443462 | 9475071 |
TU1384726 | False | 1147 | lncRNA | 0.38 | 2 | 9441509 | 9442715 |
TU1384727 | False | 4100 | lncRNA | 0.42 | 6 | 9441509 | 9452572 |
TU1384731 | True | 4186 | TUCP | 0.42 | 4 | 9441509 | 9446997 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110489464 | LOC106604611 | coding | downstream | 103402 | 9338122 ~ 9340060 (-) |
LOC110488741 | LOC106604750 | coding | downstream | 107577 | 9297301 ~ 9335885 (-) |
taf7 | taf7 | coding | downstream | 197239 | 9233966 ~ 9246223 (-) |
LOC110488737 | LOC106604752 | coding | downstream | 209900 | 9221617 ~ 9233562 (-) |
xkrx | LOC106604757 | coding | downstream | 486920 | 8944381 ~ 8956542 (-) |
LOC110488748 | hnrpg | coding | upstream | 3412 | 9478483 ~ 9484212 (-) |
LOC110488750 | LOC106604745 | coding | upstream | 29123 | 9504194 ~ 9510958 (-) |
LOC110488752 | LOC106604742 | coding | upstream | 144090 | 9619161 ~ 9624151 (-) |
LOC110488755 | NA | coding | upstream | 201183 | 9675878 ~ 9710252 (-) |
LOC110488756 | fgf13 | coding | upstream | 328312 | 9803383 ~ 10006358 (-) |
G1212560 | NA | non-coding | downstream | 2364 | 9440579 ~ 9441098 (-) |
G1212562 | LOC106604808 | non-coding | downstream | 10164 | 9430887 ~ 9433298 (-) |
G1212508 | NA | non-coding | downstream | 29295 | 9407771 ~ 9414167 (-) |
G1212498 | NA | non-coding | downstream | 42600 | 9400573 ~ 9400862 (-) |
G1212487 | NA | non-coding | downstream | 58849 | 9384315 ~ 9384613 (-) |
G1212754 | NA | non-coding | upstream | 63576 | 9538647 ~ 9538978 (-) |
G1212864 | NA | non-coding | upstream | 242392 | 9717463 ~ 9717693 (-) |
G1212868 | NA | non-coding | upstream | 244704 | 9719775 ~ 9720085 (-) |
G1212484 | NA | other | downstream | 63332 | 9379550 ~ 9380130 (-) |
G1212483 | NA | other | downstream | 63935 | 9379194 ~ 9379527 (-) |
G1212367 | NA | other | downstream | 224897 | 9216988 ~ 9218565 (-) |
bcorl1 | LOC106604760 | other | downstream | 577303 | 8859834 ~ 8900886 (-) |
G1212205 | NA | other | downstream | 606294 | 8836788 ~ 8837168 (-) |
LOC110488761 | NA | other | upstream | 720006 | 10192267 ~ 10270937 (-) |
LOC110488774 | LOC106604718 | other | upstream | 1370875 | 10844755 ~ 10849852 (-) |
LOC110488799 | LOC102314576 | other | upstream | 1886440 | 11361504 ~ 11364211 (-) |
LOC110488801 | rab33b | other | upstream | 1916937 | 11390055 ~ 11393328 (-) |