LOC110488803 (LOC106604691)


Basic Information

Item Value
gene id LOC110488803
gene name LOC106604691
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 11398875 ~ 11413521 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021561197.2
CAAGGCTGGAGTTAAGAAAAGGGCTGAAAGTGCAATGCAGCCTTATCAGTAAAGAATCCATTTTACATCACGTCTATTGCCGAAGCGATGCACTATACTTTATAACACGTCCCCCCTTCTGTAACTGTCTTTGATTGATTGGTTACATTTGCAACTTTTCATTTCGATCATTTTGCACAGCACGCACGCAGACGCGGAGAACAGCTTGACCCGGGGGAGAAGGTATTCGGCCATTTTGGTCTAAAGGGGGCCTTGGCTGTCACCACGTGAGGAAGAAGAGCCCGAAATAGAGCAAGACAACTCCGGGAACTTTGCCTCAAAAAGaccgagaggggagagagaggaaacgtCGATTCATGCTTGAAGCTACAGAAGAGTAGCCAGTTTACAGAATGCCCTCAATTACTCTACCGCCGAAGGAGAATGCTCTCTTCAAGAGAATTTTGAGATGCTACGAGCACAAGCAGTACAGAAATGGACTCAAGTTCTGCAAACAGATCCTCTCCAACCCAAAGTTCACAGAGCATGGAGAGACACTGGCGATGAAAGGCCTGACCCTGAACTGTTTGGGGAAGAAGGAGGATGCGTATGAGCTGGTGAGACGAGGCCTGCGCAACGACCTCAAGAGCCATGTCTGCTGGCATGTGTACGGTCTGCTGCAGCGGTCGGATAAGAAGTACGACGAGGCCATCAAGTGCTACCGCAACGCTCTGAAGTGGGACAAAGACAACCTGCAGATCCTCAGGGATCTTTCACTGCTCCAAATCCAGATGAGAGACCTGGAGGGCTACAGGgAGACCCGCTATCAGCTCCTGCAGCTGCGTCCAGCGCAGAGGGCCTCGTGGATCGGCTACGCCGTGGCCTACCACCTGCTGGAAGACTTTGAGATGGCCGCCAAGATCGTCGAAGAATTCCGCAAAACACAACAGACATCGCCAGACAAAGTGGACTACGAGTATAGTGAGCTGCTGCTGTACCAGAACCAGGTGCTCAGGGAGGCGGGGCTGTTCAAGGAAGCACTGGAGCACCTCACCACCTACGAGAAACAGATCTGTGACAAGCTTGCTGTGGAGGAgaccagagGAGAGCTGCTGCTGCAGCTAGATCGCTCGGAGGAGGCCACAGAAGTCTACCGACAACTCCAGGAGAGGAACCCTGAGAACTGGGCCTACTACCAGGGTCTGGAGAAAGCACTGAAACCAGCAAGCATAGAGGAGAGGCAGAAGCTCTATGAGGAGGCATGGGTGAAGTATCCCAAAGGACTGGTTCCCCGGAGGCTGCCTCTCACCTTCCTCACAGGTGAGAAGTTCCGTGAATGCCTGGACTGCTATCTGAGGACCAACTTCAGTAAAGGCTGTCCGCCTGTCTTCACCACTCTGAAGTCCCTGTATCACGACAAGGAAAAGGTGTCAATCGTTGAAGAATTAGTGGTTGGATACGAGACGTGTTTGAAAAGCTGTCGAATGTTCAATCAAAATGATGGTGGTAAGGAGGAGCCCCCCACCACACTACTGTGGGTCCAGTATTTCCTGGCGCAGCACTTTGACCACGTGGGCCAGCAGACGCTAGCCCTGGACTACATCAACACCGCCATCGAGAGCACACCCACGCTCATAGAACTGTTCCTCATCAAGGCCAAGATATACAAGCATGCAGGTAACATAAAGGAAGCAGCCAGGTGGATGGACGAGGCCCAGGCTCTGGACACTGCTGACCGCTTCATCAACTCAAAATGTGCCAAGTACATGTTGAAGGCCGGCCTGGTCAAAGAGGCTGAGGAGATGTGCTCAAAGTTCACAcggGAGGGTGCGTCGGCGGTAGAGAATCTCAATGAGATGCAGTGTATGTGGTACCAGACAGAATGTGCTCTGGCCTACAAGTCCATGAACAAGTTTGGAGACGCTCTCAAGAAGTGCCATGAGATCGAGAGGCATTTTGTGGAGATCACGGACGACCAGTTTGACTTCCACACGTACTGCATGAGGAAGATGACGCTGCGATCCTACGTGGACCTGCTCAAGCTGGAGGACGTGCTGCGCATGCATCCCTTCTACTACAAAGCTGCCCGCACCGCCATCCAGATCTACCTCGGCCTGCACGACAACCCCCTCACCGACGACAACAAGGAACACCAGGCCGACGccgAGAACCTGAATGACAAAGAGCTGAAGAAGCTGAGGAACAAGCAGAGACGAGCCCAGAAGAAAGCCCAactagaggaggagaagaagaacgcTGAGAAGGAGAAACAGCTGAAGaaccagaagaagaagaaagaggacgACGACGAGGAGATCGGAGGACCCAAGGAGGAGCTCATACCAGACAAACTAGCCAAGGTAGAGAACCCACTCGAGGAGGCAGTGAAGTTTTTAACCCCCCTGAAAAACCTGGTGAAGAACAAGATTGAGACCCACCTCCTGGCCTTTGAGATCTACTTCAGGAAAGAGAAGTACCTGCTGATGTTGCAGTCAGTGAAGAGAGCGTTCTCCATGGAGCCCTCCCACCCTTGGCTGCACCAGTGTCTAGTGCGCTTCTTCAAAGGAGTGTCGGACAGTAAGGACCTACCACAGGCTGTGCGGACTGTTTTGAAGCAGGAGATATCGCGGCTGTTTGGGGAGAGCAACCCACAGAGCTTCAACAAGAACTACCTGAGCCAACACTCCAACTCTATACCACACCGTGTGGctgCTGCTAAGATGATGTTCTATCTGGACCCGTCCTCGGACAAGATGGCCTCTGAGCTGGCTACAGCGCTGGATGAGTCCCTCAATGGGAGAAGCATCACGATCTGCACAGAGGTGCTGGAGGCGCTGCGTGATGGAAATCTGGGCGACGGGCATCAGAAGGCAGCGGAGGTGTACCGCGCCGCATGTAACAAGCTGTACCCCCACACCCTGGCCTTCATGCCCCCTGGTTACGAGGACAACGCCTCCACCATCAACGCCAACGGAGACCTGTCAGCCGGCGAGCACGACGACATGGCAAATGACAtgtgagaggagagcgagagagtagagGAGCACACACGCTGCCAGTCGGCAGTGACAAACCCCAGCAAAGGTTGTTTGTTCGTGAATGCCCCCTGCAGTGCACTGACCTGGACTGAGAGCcgcagagggaagaggaggaaaaaACGAATGCCTATTTTACTTTTTTTAAACCCTGTTGACAACTCTATTCTTTAACTGAAACAAAATAAACAGTATGAGAAGAGTGTAAAGTGGTTAGGGTGGCTGCCGTTAAGTCAGGTTTTTACTCCTGTGTTTTCACGCCTGTATTTCTCCTGTATGTGCATCTGCTTCTCACGTTTTTAAAGGTAATTTATATATTAAAAATGACAAAGAATAAAAAAGTTTGCAAAAGTTGAAAGATATCaattgtagtggtggtgatggaggattGTGGTTGTACTTGTGGACTGGCGTGTGCCAATAAAGAAAGGTGGAACTTTTAAAAGGAGACATCACTTATTTGGGGGAGGCGTAGGAGCGATGCACTCAGTTACTGAGCTCAAACGGTCCTCTGCTTGGCCACGAGGGCGCAGTGGTAGTTCCTGGCGTGGCCTgcaggaggggacaggacagcTGATCTGAATGCAGGGAGACAGAACTCAAAGCTCACCTGGACTGCTGTATGACTGATGTGCAGATTTATtgggttttattttattttccgcTCAGTATTTTCCTTTCTAGTTGTACCCATGTGAAAGTCTCATAAAACCACCATGAtaaaacaaa

Function

NR:

description
N-alpha-acetyltransferase 15, NatA auxiliary subunit isoform X1

GO: NA

KEGG:

id description
K20792 NAA15_16; N-alpha-acetyltransferase 15/16, NatA auxiliary subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021561197.2 True 3743 mRNA 0.51 20 11398875 11413521

Neighbor

gene id symbol gene type direction distance location
LOC110488801 rab33b coding downstream 5547 11390055 ~ 11393328 (-)
mgst2 mgst2 coding downstream 33021 11364601 ~ 11365854 (-)
LOC110488799 LOC102314576 coding downstream 34664 11361504 ~ 11364211 (-)
LOC110488796 LOC106611772 coding downstream 95921 11299273 ~ 11302954 (-)
LOC110488795 LOC106604699 coding downstream 121188 11239258 ~ 11277687 (-)
nocta LOC106604687 coding upstream 48494 11462015 ~ 11489186 (-)
LOC118938696 NA coding upstream 539858 11953379 ~ 11983501 (-)
LOC110488809 LOC106604685 coding upstream 844991 12258512 ~ 12276740 (-)
LOC110488811 LOC106604684 coding upstream 1150390 12563911 ~ 12568719 (-)
LOC110488815 LOC106604681 coding upstream 1174553 12588074 ~ 12669699 (-)
G1214819 NA non-coding downstream 24629 11373853 ~ 11374246 (-)
G1214828 LOC100194703 non-coding downstream 25230 11373322 ~ 11373645 (-)
G1214804 NA non-coding downstream 66323 11329912 ~ 11332552 (-)
G1214802 LOC106604697 non-coding downstream 69805 11326385 ~ 11329070 (-)
G1214859 NA non-coding upstream 30157 11443678 ~ 11443947 (-)
G1214858 NA non-coding upstream 31313 11444834 ~ 11446745 (-)
G1214861 NA non-coding upstream 42230 11455751 ~ 11455951 (-)
G1214865 NA non-coding upstream 45926 11459447 ~ 11459684 (-)
G1214919 NA non-coding upstream 132240 11545761 ~ 11545977 (-)
LOC110488774 LOC106604718 other downstream 549292 10844755 ~ 10849852 (-)
LOC110488761 NA other downstream 1128005 10192267 ~ 10270937 (-)
LOC110488750 LOC106604745 other downstream 1889368 9504194 ~ 9510958 (-)
G1214997 NA other upstream 161286 11574807 ~ 11575707 (-)
G1215349 NA other upstream 480501 11894022 ~ 11896801 (-)
G1215447 NA other upstream 550972 11964493 ~ 11976777 (-)
G1216013 NA other upstream 1064498 12478019 ~ 12478467 (-)

Expression

LOC110488803(LOC106604691) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 30.
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LOC110488803(LOC106604691) Expression in each Bioproject

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LOC110488803(LOC106604691) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network