ankrd13d (LOC106604675)


Basic Information

Item Value
gene id ankrd13d
gene name LOC106604675
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 12860779 ~ 12870657 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021561227.2
TCGGCTTCTTGTCTTAGCCCAGTGTTTTACAAATCTGATCCTTGGGATCTTATCTACGggttgtgcaggcttttgttacGGTGTCAGGTGATTCGCTGTGTACAtgtaataccttttttttttttttgggcgCAAAGAGCCCGTGGTCATAAACTGGAGATTCTCACCATTGCCCCACAACTCTACTTGACATTGGCATTAGAAGTGGGGATAGAACAGTTGTTTACCCATCAATGATTGTATGGCAACATGCATTACGCGCCCTATCTTCCTCACCCACTCCAGCTGCTAGCAATAACCTGGAACTAAAGCGACGCTGAAAATGACgtgaaatataaataaataatgcaaACTGGGGTGTGTAAATTGTCTCAGCTGCTGCAGTCTGTTATTGTTAAGAATACCGGACTGTGTAATAGTGGTTTGTTGTTTCCAGAATGTTGGTGATTGGAATATGAACACCGACAAGGTATATTGACAGCATCCGAATTGACATCGCTATCATCGGACGTATTATATACTCGAGTGACCTGGATGTGTATTCGAAATAGGCCGTATCTCGGTCTATTATTTTGACTGCACAGGATCAGAAAAAAAAACATCGCGAAAGCGAGTGGGTGATGATAGGGAGTTGTTTGCTTGTTAGCACATCAGCAGGACATGATACCGTCGTTAGTTAAACAAACGGCATTGCTAGACTAGAAATGGACATGGTTAGACGTgcaatgttagccagctagctaacaagcaagatggaatggaaaataagtGCGGTCATATGTTCTTAGCCAGTTAGCCGCTTTCCTGGCTAATGGGTAGACGAGGGCTAGCTAGCTATGTATTTTAATCGGCACCTACACCTATCCTATTGCTAATTACTTTGCTAACTATTACCCGTTTTATAAAGTAGAATCTTGCTACCTTGCGGGATTTTTTTGTGCACGCGTCCTCACACGTCTCTTGAGAGAGAACATTTTTGCTGCTGCTGGAAGATAAACGGTGAAAGCTGCTACATTTGATAAACAATGGCTCAAGAGGCGTTTCCTTTTCATTTTCTGGTTTGGAACAACCAATACCTTGAGCTTGAACGGCAACTACAGAAAAACGAGGAGAATGTGGATCGCTTGGACCCGCGGGGGCGCACCCCGCTAGAGCTGGCTGTGTGTCTGGGCCACCTGGAATCAACCCGTGTGCTGCTCAGACACTCCGCAGACCCAACGCACTGCAACGCTCAGAGCTGGACTGTTTTGCAGGAGGCAGTGAGCACAGGGGACCCTGAGCTTTgtcagctggtgctgcagtataGAGACTTCAAGCGAGCCACAGAGAGACTGGCCGGCATCCCAGAACTGCTCAGCAAGCTAAGACGGGCCCGGGATTTTTACGTGGAGATGAAATGGGAGTTCACCAGttgggTCCCCCTGGTCTCCAAGGTGTGTCCCAGTGATGTGTACCGCGTGTGGAAGAGTGGCTCGTGTCTGCGGGTGGACACCACTCTACTGGGATTTGAGCACATGACCTGGCTCAAGGGCCGTCGCAGCTACATCTTTAAGGGCGAAGAGAATGGCGCTGTGGTGATGGAGGTGGACCATGACAAGCAGGTGGTGTACACagagcctctgtctctctccctgcggGACGCTCCGTCTCTCCTGGCTGCCATGCTGCCCACCCAGGAGAACACCGCCCAGAGACTCACCTCCCCTATCGTCTCCACACACCTCAACACACGCAACATCGCCTTCGAGAGGAACAAGTCTGGCATTTGGGGCTGGCGCTCTGAGAAGAGTGAGGCAGTCAGTGGCTACGAGGCAAAGGTGTACAGCGCCACTAATGTGGAGCTGGTGACTCGATCAAGAACAGAGCACCTGTCGGACCAGGACAAGTCAAAGAGCAAAGgCACCAAGACTCCTCTTCAGTCCTTCCTGGGGATAGCTGAGCAGCATACAGCTCCTAATGGGAGTAATGTTTCTCAGTGTGCCAGCCCCCATAACCCCACAGCCATCACAGCTGAGGAATACTTTGACCCAGAGTTCCAACTCAATGAGCGAGACATCGGACGCCCCGTGGAGCTCACCAGCAAAGTCCAGAGgtTTAAGGCCCATCTGTGGTTGAGTGAGGCTCACCCTCTGTCATTGGCTGAGCAGGTCACGCCCATCATTGACCTCATGGCCATCTCCAACGCCCATTTTGCCAAACTACGTGACTTCATCACTCTGAGCCTGCCCCCCGGCTTCCCGGTCAAAATAGagatCCCTCTGTTCCATGTGTTGAATGCCAGAGTGACCTTCAGTAACCTGTGTGGCTGTGATGAGCCTGTCAGCTCGgttactgtacacacacctgaGGAGGCCCCCGAGGCTGGGCAGGCCCTGCATCCATTTAACTGCGAGGTGGACCCCTCCGTATTTGAACCACCCCCAGACTACACCACGCTTGGTCCAGGCCGCAGCGAGCCAATGAGAGATGAGGATGATAACTTGCTGCAGTTTGCCATCCAGCAGAGCCTATTGGACGCAGGGACAGAGAGCGACCAGgtgactATATGGGAGGCTCTGACTAACAGTCGTCCTGTTTCTGGGCAAATACAGTCACCCCTGTATGAGGACGACTCTCAGCTGGAGAGGGCCATCCAGGAGTCCCTGTCGATCTCATTGGCTGGTGGTAAGGAAGGAGAGCCTGCAGATCCTGCCCTTCCCCTGTCAGTCTCGCCGTCGCACCCCGGAGCCTACTCCCCTCCCTCCTACAGCTCAGTGGCTGAGCCGCGGTTGCCGGGGCCATTTCCCGGGGGAAACAGCTTTGACGAGCAGCTACGCATCGCCATGGACCTCTCGTGCAGGgaacaggaagagatggacagGGCAaggcaggaggaagaggatgagctGGAAAGGATCCTTCAGCTGTCACTTTTAGAGAAGTAGCCACGTGTCTTGATTGGGTAACAAACATGTTAACttattgttttagtttttttatcCTGCAatgttaaattattattatttagtttTAATTTATGATGTCTTAATAATGGGGCATTAGAGTATGGGACCAGActgcagggagggaggtagagatggtaCTGTCCTCAAGGTGGGTAAAAGCAATATGTTGGAAACTACTTTCCATTCACCAGTGGGCACCTGCTGTATTTGTTGTCACCTGTCCAGTGGGAAGGGTTGTTTTGAGAGATGAGGGGTACTGGGAGGGAAAGATGGTCAAACTAGCAGTGCTGCTGTAAGAGCGCTCTTCAGGCCCTGAATGGATGGAGAGAACACTTTTATTTTGCTTTATTTTTCACAACCCAGCTGTCATTGAGTGATAAGTCCTTTAACCTTTCACCTATGATACAAACTGATAATAGTGATATGATTTATAAAATACTGATATATATAAGATAATTattgataaaaaatatattatgcTGGTTGACTCCTGCGTGTGACTTGGAAAATAAATGTATCCTGAAGCA

Function

NR:

description
ankyrin repeat domain-containing protein 13D-like

GO: NA

KEGG:

id description
K21437 ANKRD13; ankyrin repeat domain-containing protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021561227.2 True 3472 mRNA 0.49 16 12860779 12870657

Neighbor

gene id symbol gene type direction distance location
LOC110488818 tri65 coding downstream 16100 12843131 ~ 12844679 (-)
LOC110488817 LOC105028880 coding downstream 32058 12820904 ~ 12828721 (-)
LOC110488816 LOC106604679 coding downstream 68199 12759166 ~ 12792580 (-)
LOC110488814 LOC106604680 coding downstream 123291 12713048 ~ 12737488 (-)
LOC110488813 LOC106611787 coding downstream 164173 12691966 ~ 12696606 (-)
kdm2ab LOC106604673 coding upstream 140 12870797 ~ 12882582 (-)
stx3a LOC106604672 coding upstream 18055 12888712 ~ 12906848 (-)
ran ran1 coding upstream 48539 12919196 ~ 12923820 (-)
LOC110488824 LOC105932619 coding upstream 53289 12923946 ~ 12927257 (-)
rad9a rad9a coding upstream 83703 12954360 ~ 12960532 (-)
G1216447 NA non-coding downstream 13487 12847057 ~ 12847292 (-)
G1216446 NA non-coding downstream 13965 12846602 ~ 12846814 (-)
G1216426 NA non-coding downstream 28819 12831671 ~ 12831960 (-)
G1216425 NA non-coding downstream 29186 12831372 ~ 12831593 (-)
G1216408 NA non-coding downstream 64997 12795458 ~ 12795782 (-)
G1216741 NA non-coding upstream 53 12870710 ~ 12906753 (-)
G1216761 NA non-coding upstream 37117 12907774 ~ 12908009 (-)
G1216765 NA non-coding upstream 42607 12913264 ~ 12913865 (-)
G1216776 NA non-coding upstream 61992 12932649 ~ 12932918 (-)
G1216780 NA non-coding upstream 64442 12935099 ~ 12935609 (-)
G1216443 NA other downstream 18026 12841496 ~ 12842753 (-)
LOC110488811 LOC106604684 other downstream 292114 12563911 ~ 12568719 (-)
G1216013 NA other downstream 382312 12478019 ~ 12478467 (-)
G1215447 NA other downstream 884002 11964493 ~ 11976777 (-)
LOC110488853 LOC106604605 other upstream 813127 13683784 ~ 13715500 (-)
LOC110488886 LOC106604622 other upstream 1686176 14542673 ~ 14642681 (-)
G1218808 NA other upstream 2123163 14993820 ~ 14994379 (-)
G1219208 NA other upstream 2447136 15317793 ~ 15318160 (-)
asb5a LOC101464329 other upstream 4527684 17395671 ~ 17399280 (-)

Expression


Co-expression Network