LOC110489472 (LOC106604583)


Basic Information

Item Value
gene id LOC110489472
gene name LOC106604583
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 16212737 ~ 16215634 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562174.2
CTGAAGCTGAGCAAGACCTTCTTGTAGAGTTTCTCCTTGAGTGAAGCATCCCCTTGGGCTTCAACATGAAGACAGCTATTCTTCTGCTTACTGTAGTCCTCATAGCTGTGTTGCCAGAGTGTGATATGGCCAAGTTTGGTCAACTGTGTAGCGAAAATTCCAGtaacaggaggaggacagaggacaactgGGGACAAGGACAGTATGGAGCAAGCAGAACAGACCATGTGCATGAGGGCATTGACATCGTGTGTAACGACGGGGCCACAGTGTACGCTCCATTTGACGTGAAACTCAGCGGCAAAGTGACAGTGTACACAAACCCGAAGAAGGCAGCCATCAACGATGGGATCAACCTCAGTGGGGAGGGTCTGTGCTTTAAGCTGTTCTACGTGAAGCCTGACAGTTACTCTGGGGTGGTGAAGAAGGGCCAGAGGATTGGGACCCTACTCCCCATGCAGAGTGTCTACCCAGGGATCACTTCTCACGTCATCTAAATGATCACAATGATAGGCCTTACTGTGTGAAAACAATTATTTATCCTTTTTTATTATTGTATGAAATACATAAATGTTGTA

Function

NR:

description
leukocyte cell-derived chemotaxin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562174.2 True 578 mRNA 0.47 4 16212737 16215634

Neighbor

gene id symbol gene type direction distance location
LOC110488913 LOC106604565 coding downstream 20105 16119869 ~ 16192632 (-)
LOC110488912 LOC106604567 coding downstream 98556 16068080 ~ 16114181 (-)
LOC110488910 LOC106604568 coding downstream 147897 15889408 ~ 16064840 (-)
LOC110488909 LOC106604570 coding downstream 324391 15864887 ~ 15888346 (-)
LOC110488908 LOC106604571 coding downstream 352395 15838605 ~ 15860342 (-)
LOC110488917 LOC106604562 coding upstream 136117 16351751 ~ 16669973 (-)
LOC118938700 NA coding upstream 728626 16944260 ~ 16945763 (-)
eif4ea LOC106604514 coding upstream 743039 16958673 ~ 16962555 (-)
LOC110488919 adhx coding upstream 747474 16963108 ~ 16970883 (-)
LOC110488920 gar1 coding upstream 755865 16971499 ~ 16976696 (-)
G1220363 NA non-coding downstream 40857 16171583 ~ 16171880 (-)
G1220314 NA non-coding downstream 145471 16067051 ~ 16067266 (-)
G1220313 NA non-coding downstream 146397 16066094 ~ 16066340 (-)
G1220312 NA non-coding downstream 146880 16065647 ~ 16065857 (-)
G1220291 NA non-coding downstream 219377 15992948 ~ 15993360 (-)
G1220430 NA non-coding upstream 62368 16278002 ~ 16278311 (-)
G1220443 NA non-coding upstream 74798 16290432 ~ 16290650 (-)
G1220448 NA non-coding upstream 79452 16295086 ~ 16295297 (-)
G1220453 NA non-coding upstream 81739 16297373 ~ 16297591 (-)
G1220493 NA non-coding upstream 111676 16327310 ~ 16327510 (-)
G1219208 NA other downstream 894577 15317793 ~ 15318160 (-)
G1218808 NA other downstream 1218358 14993820 ~ 14994379 (-)
LOC110488886 LOC106604622 other downstream 1655356 14542673 ~ 14642681 (-)
LOC110488853 LOC106604605 other downstream 2497860 13683784 ~ 13715500 (-)
G1216443 NA other downstream 3369984 12841496 ~ 12842753 (-)
asb5a LOC101464329 other upstream 1182707 17395671 ~ 17399280 (-)
G1225043 LOC108238713 other upstream 3620244 19835878 ~ 19836319 (-)
G1225499 NA other upstream 3918077 20133711 ~ 20134053 (-)
G1225505 upf3b other upstream 4106144 20321778 ~ 20325219 (-)
G1225647 LOC106604448 other upstream 4250096 20465730 ~ 20470523 (-)

Expression


Co-expression Network