eif4ea (LOC106604514)


Basic Information

Item Value
gene id eif4ea
gene name LOC106604514
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 16958673 ~ 16962555 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036943044.1
ACCGCAAATGTGAGAATGATTGTTGGAATGTTCGACTCTTCGAGGGCTCCTAAGTGAACCACGAGCTGTCGCTAGCTAATCGATTGTGCATGCTGGAGTTGGGGATATAGCAAGTTACAAGACGTCTCAATGTTAGTCACTATACCTTCATAAGTATTGAAGGTTAAAAAGATCCATGCCCAGCAGTGTCAACCGTTAACAGTACTACTAACAGGCATGATCGCCACCGCCCCTTCAAGAAAGGTGGCTAGCGAGTTGACCTTCTTGGAATCAAGTTTGAATCCCCCTAATTCCGAGGCGAAAAAAAGTGAAACTGGTCAAGAAATTGTAAATCCTGAAGATTACATCAAACATCCACTACAAAATAGATGGGCTCTGTGGTTCTTTAAGAATGACAAAACGAAAACCTGGCAAGCAAACCTCCGTCTCATCTCCAAGTTTGACACAGTGGAAGACTTCTGGGCTCTGTATAATCACATCCAACTATCAAGTAACTTGATCTCCGGCTGTGACTACTCACTTTTCAAGGATGGTATCGAGCCCATGTGGGAGGACGAGAGGAACAAGCGTGGTGGCAGGTGGCTCATCACACTTTCCAAACAGCAGCGCAGGGCCGACCTCGACCGCTTCTGGCTGGAAACGCTCCTGTGCCTAGTGGGCGAAGCCTTCGATGACCACAGTGATGATGTATGCGGGGCAGTAGTTAACATCCGAACGAAAGGAGACAAACTTGCGATTTGGACAACAGACTACGAAAACAAGGATGCTATTACACACATAGGACAAGGGTGGAAGGAGAGGTTAGGCGTGCCACACAAGGTGATCATCGGATATCAATCACACGCTGACACTGCCACCAAGAGTGGTTCCACCACCAAGAACAAGTTTGTTGTCTAAGGAGTTGTTTTTTTTGGTTGTTTTTCCTTTCCGTTTCCATGGCGTTTGTTGAAATGCTGTTGCGAAGTTTAATCTGCTACCCAATTGAAACCAAAGCTTCAACACAGACGATTGCCTTTATTCAATGAATTGCAATATGATTTCACGACAAAATTTGCCCTTTGCCCTCAAAATTTTCCCCTCATATTTGCCTTGAAACAAACCTATACCTTCGATGAAGGGTGGGAATAACCATGAGAATtgaaataccccccaaaaagttATCCATGTTCCTTTTTTTAATGCGCCATTTCCGTTTTATTACTGAGGATATACTAGGAGGCTTTTTGTTGATATATTTTATGTTTAACAGCATCACACTCGTAGCTGCCAGGGATTTGTCTGTGTTTTCGGGACTCCTAATtccaaactgtaaaaaaaaatatataaaaaatatatatatattagtacctgtcaaaagtttggacacctactcattcaagggtttttctatatttttactattttctacattgtaa
>XM_021561385.2
CACATCTGAGCATGCGCAGTTAGGTTTACCATACTTGGTTGTCATGTTGGAAAACGCAATCCAATCCGCTTTTATGTTTCACATTACAGAATTGTGAATCCGATAATCAGAAGATGGCGACAGCTGAGTCGGAATCAAGTTTGAATCCCCCTAATTCCGAGGCGAAAAAAAGTGAAACTGGTCAAGAAATTGTAAATCCTGAAGATTACATCAAACATCCACTACAAAATAGATGGGCTCTGTGGTTCTTTAAGAATGACAAAACGAAAACCTGGCAAGCAAACCTCCGTCTCATCTCCAAGTTTGACACAGTGGAAGACTTCTGGGCTCTGTATAATCACATCCAACTATCAAGTAACTTGATCTCCGGCTGTGACTACTCACTTTTCAAGGATGGTATCGAGCCCATGTGGGAGGACGAGAGGAACAAGCGTGGTGGCAGGTGGCTCATCACACTTTCCAAACAGCAGCGCAGGGCCGACCTCGACCGCTTCTGGCTGGAAACGCTCCTGTGCCTAGTGGGCGAAGCCTTCGATGACCACAGTGATGATGTATGCGGGGCAGTAGTTAACATCCGAACGAAAGGAGACAAACTTGCGATTTGGACAACAGACTACGAAAACAAGGATGCTATTACACACATAGGACAAGGGTGGAAGGAGAGGTTAGGCGTGCCACACAAGGTGATCATCGGATATCAATCACACGCTGACACTGCCACCAAGAGTGGTTCCACCACCAAGAACAAGTTTGTTGTCTAAGGAGTTGTTTTTTTTGGTTGTTTTTCCTTTCCGTTTCCATGGCGTTTGTTGAAATGCTGTTGCGAAGTTTAATCTGCTACCCAATTGAAACCAAAGCTTCAACACAGACGATTGCCTTTATTCAATGAATTGCAATATGATTTCACGACAAAATTTGCCCTTTGCCCTCAAAATTTTCCCCTCATATTTGCCTTGAAACAAACCTATACCTTCGATGAAGGGTGGGAATAACCATGAGAATtgaaataccccccaaaaagttATCCATGTTCCTTTTTTTAATGCGCCATTTCCGTTTTATTACTGAGGATATACTAGGAGGCTTTTTGTTGATATATTTTATGTTTAACAGCATCACACTCGTAGCTGCCAGGGATTTGTCTGTGTTTTCGGGACTCCTAATtccaaactgtaaaaaaaaatatataaaaaatatatatatattagtacctgtcaaaagtttggacacctactcattcaagggtttttctatatttttactattttctacattg

Function

NR:

description
eukaryotic translation initiation factor 4E-1A

GO:

id name namespace
GO:0006413 translational initiation biological_process
GO:0006417 regulation of translation biological_process
GO:0005845 mRNA cap binding complex cellular_component
GO:0005634 nucleus cellular_component
GO:0016281 eukaryotic translation initiation factor 4F complex cellular_component
GO:0000340 RNA 7-methylguanosine cap binding molecular_function
GO:0005515 protein binding molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03259 EIF4E; translation initiation factor 4E

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036943044.1 False 1415 mRNA 0.42 7 16958673 16962291
XM_021561385.2 True 1276 mRNA 0.42 7 16958676 16962555

Neighbor

gene id symbol gene type direction distance location
LOC118938700 NA coding downstream 12910 16944260 ~ 16945763 (-)
LOC110488917 LOC106604562 coding downstream 288700 16351751 ~ 16669973 (-)
LOC110489472 LOC106604583 coding downstream 743039 16212737 ~ 16215634 (-)
LOC110488913 LOC106604565 coding downstream 766041 16119869 ~ 16192632 (-)
LOC110488912 LOC106604567 coding downstream 844492 16068080 ~ 16114181 (-)
LOC110488919 adhx coding upstream 553 16963108 ~ 16970883 (-)
LOC110488920 gar1 coding upstream 8944 16971499 ~ 16976696 (-)
LOC110489473 LOC107705928 coding upstream 60204 17022759 ~ 17027113 (-)
lrit3a LOC106604555 coding upstream 362387 17324942 ~ 17334173 (-)
gpm6aa gpm6a coding upstream 374840 17337395 ~ 17354719 (-)
G1221449 NA non-coding downstream 24929 16933502 ~ 16933744 (-)
G1221440 NA non-coding downstream 43834 16914206 ~ 16914839 (-)
G1221126 NA non-coding downstream 138069 16820166 ~ 16820604 (-)
G1221118 NA non-coding downstream 147287 16811151 ~ 16811386 (-)
G1221115 NA non-coding downstream 148542 16809891 ~ 16810131 (-)
G1221639 NA non-coding upstream 249961 17212516 ~ 17212971 (-)
G1221673 NA non-coding upstream 283332 17245887 ~ 17246107 (-)
G1221901 NA non-coding upstream 329568 17292123 ~ 17292355 (-)
G1221902 NA non-coding upstream 331195 17293750 ~ 17294055 (-)
G1221909 NA non-coding upstream 342972 17305527 ~ 17305838 (-)
G1219208 NA other downstream 1640513 15317793 ~ 15318160 (-)
G1218808 NA other downstream 1964294 14993820 ~ 14994379 (-)
LOC110488886 LOC106604622 other downstream 2401292 14542673 ~ 14642681 (-)
LOC110488853 LOC106604605 other downstream 3243796 13683784 ~ 13715500 (-)
G1216443 NA other downstream 4115920 12841496 ~ 12842753 (-)
asb5a LOC101464329 other upstream 435786 17395671 ~ 17399280 (-)
G1225043 LOC108238713 other upstream 2873323 19835878 ~ 19836319 (-)
G1225499 NA other upstream 3171156 20133711 ~ 20134053 (-)
G1225505 upf3b other upstream 3359223 20321778 ~ 20325219 (-)
G1225647 LOC106604448 other upstream 3503175 20465730 ~ 20470523 (-)

Expression


Co-expression Network