asb5a (LOC101464329)


Basic Information

Item Value
gene id asb5a
gene name LOC101464329
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 17395671 ~ 17399280 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021561395.2
AACAGCACTTAAGCTTCCCAGTGTCAGTGACAGACAGTGTGCCAACATGCTTGGCGCATGGAAAGGGAGCACCAATGCAGCAAACAGCAACACAAAATCGAATCTTGTTGTGCGTTATTAAAGGTCAGTGATGTAGTTTACACTAGTTTTCCCAGAACATGTTATGTTTCTGATTTAGTGTCTTGGTCTTCCATTAATACATCAAGTAGGTTAGGCTagttcaagagaaaatagattTGACGGTTATTGCCAATGGAGACATATTGGCTCACCCTCAATTGGACAACATGGATCCTTAGTACTCTACCTTATATGAAGTGAAATAGAATAGAAGTGTCATAGATCAGTGATATGGAGAAAGGTAACAATGATGATGCAGTCTGGAATGCATCTGGTGCTATTCTGGATATtgacccagGGTCCTGGGCAGACCGCTCACCCTTACATGATGCTGCATGCCAAGGTCGTCTCTTAGCTCTGAGGAATCTCATTTTACAGGGCCACAATGTAAATGTAGTCACTATAGACCATGTGAGTCCTCTGCACGTGGCCTGCCTTGGAGACCATGTAGCATGTGCCAGAGCTCTGATCGCTGCAGGAGCCAATGTGAACGTCACCACCATTGATGGGGTGACTCCTCTTTTCAACGCGTGCTCAGTGGGCAGTGTATCATGTGCAGAGGTCCTCCTGGAGAACGGGGCCAAACCCCAGGCTCTGGTATTTCAGCCCTCGCCCATTCACCAAGCCAGCAGTAAAGGCAACAGTGGGTGTGTGGAGACTCTAATCAGATGGGGAGCCGACGTGGACTTTGACATTCCTCACCTGGGAACGCCCCTCTACACCGCCTGTGTCTCTCAGGAGATAGAATGTGTccagaggctgctgagggaagGAGCAAATGTACAGAAAGGTAGATATATGGAGTCTCCCTTACACGCTGCCGCTGAGAAGGACTGCACTGCCATTGTTAAGCTGTTGTTGGACTTTGGGGCAGATATCCATGCCAGGAACATTGAGTTCCAGAGACCTGTGGAGGCTGCTCCCCCCAGCAGCCTGACAGAGGGGTTTCTACTGGTCTATGAGGCCACGCCCCAACCATTGAGTCAGCTGTGTCGACAGCGTATCCGTGACCGTGTGGGCCGTGACAGGTTTCACCTCATCAACCATCTTCCCCTTCCCAACCCCCTCAGGAACTACCTCCAGTACAGATGAGCTTAGAACGTCACAATCTCAaaggctgtggtggtggtggtggtggtggcatctTCCTGGTGTCAGTCATTCATGTGAACTCAACAGCCTGCAAGGATAGAAGGAGCACTACTTGCACTTGAAGCAATGAAATACATGCTTGATTTAGCCTATACCAGATTTTAGTATGGTTCACAAGAAACTGCTAAAATTTGGGGTTGGAGCAATGACCAGCAATCATGGTTTGCTATGAACATTTTCAAGGGAGAGTTTCATTTAAATCCAGAGCTggactgtttaaaggcacttagaAAATGTGTTCCTCATCAATATTTTGCAGCAGGTGTATAAATTAATCTGTAGCTGGCTCATATGCTCATACAATAACACAATTTAAAGTGCTTTCATATTATGGAAAATGCATTTAATTTGGATTGTTATATTAACATGGTTTATCACGTTATATATTTTAGATTAGACCTGTGCATCTGCAAAACTTAAAATTCACCAAAATCTTTACCATTATCATTGAGAACACTACTCCTACATTCATATCCTCAAAAAATATAGATATAAACTTGCTTGCTTGATGTGTTTTATGTGTGATCTTATTGACTGAGCTGCTTGCTATTATTTTATTAAAACGTTTTGAATTCCA
>XM_021561396.2
cctgactgactgtggtcTGTAGGCAGACTTGCAGACCAAAACAGCACTTAAGCTTCCCAGTGTCAGTGACAGACAGTGTGCCAACATGCTTGGCGCATGGAAAGGGAGCACCAATGCAGCAAACAGCAACACAAAATCGAATCTTGTTGTGCGTTATTAAAGGGTCCTGGGCAGACCGCTCACCCTTACATGATGCTGCATGCCAAGGTCGTCTCTTAGCTCTGAGGAATCTCATTTTACAGGGCCACAATGTAAATGTAGTCACTATAGACCATGTGAGTCCTCTGCACGTGGCCTGCCTTGGAGACCATGTAGCATGTGCCAGAGCTCTGATCGCTGCAGGAGCCAATGTGAACGTCACCACCATTGATGGGGTGACTCCTCTTTTCAACGCGTGCTCAGTGGGCAGTGTATCATGTGCAGAGGTCCTCCTGGAGAACGGGGCCAAACCCCAGGCTCTGGTATTTCAGCCCTCGCCCATTCACCAAGCCAGCAGTAAAGGCAACAGTGGGTGTGTGGAGACTCTAATCAGATGGGGAGCCGACGTGGACTTTGACATTCCTCACCTGGGAACGCCCCTCTACACCGCCTGTGTCTCTCAGGAGATAGAATGTGTccagaggctgctgagggaagGAGCAAATGTACAGAAAGGTAGATATATGGAGTCTCCCTTACACGCTGCCGCTGAGAAGGACTGCACTGCCATTGTTAAGCTGTTGTTGGACTTTGGGGCAGATATCCATGCCAGGAACATTGAGTTCCAGAGACCTGTGGAGGCTGCTCCCCCCAGCAGCCTGACAGAGGGGTTTCTACTGGTCTATGAGGCCACGCCCCAACCATTGAGTCAGCTGTGTCGACAGCGTATCCGTGACCGTGTGGGCCGTGACAGGTTTCACCTCATCAACCATCTTCCCCTTCCCAACCCCCTCAGGAACTACCTCCAGTACAGATGAGCTTAGAACGTCACAATCTCAaaggctgtggtggtggtggtggtggtggcatctTCCTGGTGTCAGTCATTCATGTGAACTCAACAGCCTGCAAGGATAGAAGGAGCACTACTTGCACTTGAAGCAATGAAATACATGCTTGATTTAGCCTATACCAGATTTTAGTATGGTTCACAAGAAACTGCTAAAATTTGGGGTTGGAGCAATGACCAGCAATCATGGTTTGCTATGAACATTTTCAAGGGAGAGTTTCATTTAAATCCAGAGCTggactgtttaaaggcacttagaAAATGTGTTCCTCATCAATATTTTGCAGCAGGTGTATAAATTAATCTGTAGCTGGCTCATATGCTCATACAATAACACAATTTAAAGTGCTTTCATATTATGGAAAATGCATTTAATTTGGATTGTTATATTAACATGGTTTATCACGTTATATATTTTAGATTAGACCTGTGCATCTGCAAAACTTAAAATTCACCAAAATCTTTACCATTATCATTGAGAACACTACTCCTACATTCATATCCTCAAAAAATATAGATATAAACTTGCTTGCTTGATGTGTTTTATGTGTGATCTTATTGACTGAGCTGCTTGCTATTATTTTATTAAAACGTTTTGAATTCCA
>TU1394921
ACTTAAGCTTCCCAGTGTCAGTGACAGACAGTGTGCCAACATGCTTGGCGCATGGAAAGGGAGCACCAATGCAGCAAACAGCAACACAAAATCGAATCTTGTTGTGCGTTATTAAAGGGTCCTGGGCAGACCGCTCACCCTTACATGATGCTGCATGCCAAGGTCGTCTCTTAGCTCTGAGGAATCTCATTTTACAGGGCCACAATGTAAATGTAGTCACTATAGACCATGTGAGTCCTCTGCACGTGGCCTGCCTTGGAGACCATGTAGCATGTGCCAGAGCTCTGATCGCTGCAGGAGCCAATGTGAGTCAATGGAGAAGATCCGTTAATAATCAAGAaaaccttcttttttttttaacatgaaaCAGTAATAATTTgtactaaataatacatttaagaAATAGCTTAATAAAGCTTTTGTAAAA

Function

NR:

description
ankyrin repeat and SOCS box protein 5-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021561395.2 False 1849 mRNA 0.45 7 17395671 17399241
XM_021561396.2 False 1593 mRNA 0.46 7 17395671 17399280
TU1394921 True 427 TUCP 0.43 3 17398341 17399235

Neighbor

gene id symbol gene type direction distance location
spata4 spata4 coding downstream 147 17390409 ~ 17395524 (-)
gpm6aa gpm6a coding downstream 40952 17337395 ~ 17354719 (-)
lrit3a LOC106604555 coding downstream 61498 17324942 ~ 17334173 (-)
LOC110489473 LOC107705928 coding downstream 368558 17022759 ~ 17027113 (-)
LOC110488920 gar1 coding downstream 418975 16971499 ~ 16976696 (-)
aga aga coding upstream 13867 17413147 ~ 17418649 (-)
ctso ctso coding upstream 226560 17625840 ~ 17634581 (-)
LOC110488931 pdgfc coding upstream 304792 17704072 ~ 17777597 (-)
LOC110489474 NA coding upstream 541647 17940927 ~ 17945892 (-)
gask1b fam198b coding upstream 605273 18004553 ~ 18013741 (-)
G1221950 NA non-coding downstream 24796 17370566 ~ 17370875 (-)
G1221948 NA non-coding downstream 27961 17367443 ~ 17367710 (-)
G1221947 NA non-coding downstream 28242 17367180 ~ 17367429 (-)
G1221916 NA non-coding downstream 78844 17316570 ~ 17316827 (-)
G1221915 NA non-coding downstream 79734 17315654 ~ 17315937 (-)
G1221968 NA non-coding upstream 7266 17406546 ~ 17406894 (-)
G1221969 neil3 non-coding upstream 7794 17407074 ~ 17407968 (-)
G1222069 NA non-coding upstream 159373 17558653 ~ 17586749 (-)
G1222093 NA non-coding upstream 207915 17607195 ~ 17607559 (-)
G1222096 NA non-coding upstream 212222 17611502 ~ 17611709 (-)
G1219208 NA other downstream 2077511 15317793 ~ 15318160 (-)
G1218808 NA other downstream 2401292 14993820 ~ 14994379 (-)
LOC110488886 LOC106604622 other downstream 2838290 14542673 ~ 14642681 (-)
LOC110488853 LOC106604605 other downstream 3680794 13683784 ~ 13715500 (-)
G1216443 NA other downstream 4552918 12841496 ~ 12842753 (-)
G1225043 LOC108238713 other upstream 2436598 19835878 ~ 19836319 (-)
G1225499 NA other upstream 2734431 20133711 ~ 20134053 (-)
G1225505 upf3b other upstream 2922498 20321778 ~ 20325219 (-)
G1225647 LOC106604448 other upstream 3066450 20465730 ~ 20470523 (-)
G1225875 NA other upstream 3323757 20723037 ~ 20723236 (-)

Expression


Co-expression Network