Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110487745 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 18240679 ~ 18242800 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| YD008 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110487745 | True | 495 | mRNA | 0.48 | 4 | 18240679 | 18242800 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488938 | LOC106604531 | coding | downstream | 10546 | 18225268 ~ 18230133 (-) |
| gask1b | fam198b | coding | downstream | 226938 | 18004553 ~ 18013741 (-) |
| LOC110489474 | NA | coding | downstream | 294787 | 17940927 ~ 17945892 (-) |
| LOC110488931 | pdgfc | coding | downstream | 463082 | 17704072 ~ 17777597 (-) |
| ctso | ctso | coding | downstream | 606098 | 17625840 ~ 17634581 (-) |
| LOC110488940 | LOC106604535 | coding | upstream | 341580 | 18584380 ~ 18774367 (-) |
| LOC110487747 | anxa5 | coding | upstream | 901330 | 19144130 ~ 19164344 (-) |
| LOC110488948 | ccna2 | coding | upstream | 947441 | 19190241 ~ 19195081 (-) |
| bbs7 | bbs7 | coding | upstream | 954724 | 19197524 ~ 19203622 (-) |
| tmem33 | LOC106604543 | coding | upstream | 960978 | 19203778 ~ 19211568 (-) |
| G1222979 | NA | non-coding | downstream | 41561 | 18197858 ~ 18199118 (-) |
| G1222974 | NA | non-coding | downstream | 42923 | 18196898 ~ 18197756 (-) |
| G1222957 | LOC106604530 | non-coding | downstream | 61601 | 18177675 ~ 18179078 (-) |
| G1222656 | NA | non-coding | downstream | 189452 | 18050970 ~ 18051227 (-) |
| G1222653 | NA | non-coding | downstream | 192035 | 18048387 ~ 18048644 (-) |
| G1223101 | NA | non-coding | upstream | 141162 | 18383962 ~ 18384745 (-) |
| G1223107 | NA | non-coding | upstream | 154307 | 18397107 ~ 18400718 (-) |
| G1223164 | NA | non-coding | upstream | 204398 | 18447198 ~ 18447461 (-) |
| G1223165 | NA | non-coding | upstream | 205383 | 18448183 ~ 18448433 (-) |
| G1223189 | NA | non-coding | upstream | 216248 | 18459048 ~ 18459249 (-) |
| asb5a | LOC101464329 | other | downstream | 841444 | 17395671 ~ 17399280 (-) |
| G1219208 | NA | other | downstream | 2922519 | 15317793 ~ 15318160 (-) |
| G1218808 | NA | other | downstream | 3246300 | 14993820 ~ 14994379 (-) |
| LOC110488886 | LOC106604622 | other | downstream | 3683298 | 14542673 ~ 14642681 (-) |
| LOC110488853 | LOC106604605 | other | downstream | 4525802 | 13683784 ~ 13715500 (-) |
| G1225043 | LOC108238713 | other | upstream | 1593078 | 19835878 ~ 19836319 (-) |
| G1225499 | NA | other | upstream | 1890911 | 20133711 ~ 20134053 (-) |
| G1225505 | upf3b | other | upstream | 2078978 | 20321778 ~ 20325219 (-) |
| G1225647 | LOC106604448 | other | upstream | 2222930 | 20465730 ~ 20470523 (-) |
| G1225875 | NA | other | upstream | 2480237 | 20723037 ~ 20723236 (-) |
