tmem33 (LOC106604543)


Basic Information

Item Value
gene id tmem33
gene name LOC106604543
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 19203778 ~ 19211568 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021561443.2
TCAGCGGCGGTGTAGTCCGCCTGTTAGCCTTACAACTTAAACACGCCCAATGAGAGAATTGAAACAATTTTTTCTCGAAATCAGAAGACACTACCTAGATTCGAGGCAATGTCTTAAGTAgcggaacatgttattactccagcCTAATAAAAGTGACACGTTTTAATTTTCGTCAAAAACAACTATATCGAAGGAGTGTCTTTTTGAGGCATGCACAAGCACATTTCGGCGAGACGACCTTTAGACCCGGTGAACGTGTTTCTGCGCACGCGCCTAGCTAACCAACGTCGCAATGACATCGCCTACAACTTGATCAGGAAGAAGCAGTTACTGCATATCTTCATACTGTCTTTGGTAGGAACGACGCAGATGGCtgagtagctagctacagtagcaaaATTAGCCAACAAAATAACACAATCACTGGTACAAGTGACACCTAACGTTGATCTCGACAGTTTCAGGGATAAACCAGAGTCAAGAAGATGGCTGACACAGAGCAAACAagtgctcctcctccccctcaatTAGGGACAGTGCAATTCATGTTGGCTAACAAACTAGAGACGGCAATGTGGCTCTCGCGGCTCTTCACCGTCTATTGCTCAGTAATGTTCATTCTACCTCTCTTAGGACCTCAGGCGGCTGCCAATTTCTATCAGCGTGCGCTGCTGGCCAACGCACTCACCAGTGCTCTGCGGCTACACCAGCGGCTTCCTCACTTCCAGCTCAGCAGAGCCTTCCTAGCCCAGGCACTCCAAGAGGACAGCTGTCACTACCTGCTGTACTCCCTCATCCTGGTCAACTCTTACCCCATTACAATGAGCATATTCTCAGTCTTCCTCTTCTCATTGCTTCATGCAACCACCTACACAAAGAAGGTTCTTGACGCAATGGGCCCCAATAGCCTTCTCTTCATGAGGAACTTCCTCAACAAGCTCTCGGCCAACCAGCAGAACATCCTGAAGTTCATCGCCTGCAATGAGATCTTCCTCATGCCAGCCACCATATTCATGCTCTTCAGTGGCCAGGGAAGCTTGCTGCAGCCTTTCATTTACTACAGGTTTCTAACTCTCCGCTATACATCAAGGAGAAACCCATATTGCCGCACCCTATTCTCAGAGCTGCGGATTCTGCTGGAACATTTCGTCATGAAGCCCGCCTGCCCCGCCTTCTTCAGAAAGATGTGCCTCAACAGTATCTCCTTTATGAGCCGCCTGGCCCCCACCGCAGTGTGACCTTACTTCCTGTTCCCACACAACCATAGTTTGTACTGTAAGGGGCGTGGCAGCATTTCAACTCGAGCGGGATGGACGAACAACAACTTTGAGAGCAAGGGAAAAAACCTTTTGAatgttagtctggtctgtcttccTGCTGCTCTGTTCATACGCTACAGCGGAGGCTGAGGCTCGGACTGCGACGCACTGAAAACTGATTGTTTTCAATATGGCTTTATGGAACAGCCGAACACTcactcccccttttctctctcgctctctttgggAATAAACACCAGCTGACTATTTGATGTGTTCTACTTCTAAGGATTGACCTTGTGATGGTTAAATGTCTTTGTCATGGAAAATACTTGTTATCTTTAAATAAAATACTAACTTCTGAGATTAGATAGTTAAATTGTACTATACATCGTTGcagtcattttattttttttaatagccAAATATTGTGCTTTTCAAAGGCGATGTCGGTTgctctgtattttattttttacatccaCTAATTCCATTTTATGTGTTCTTTTTCTTACACGAAAAGCATTGGTTATGATTTTGTCTTAACACATTTCTACTCTTATGAATTTGAAAAGTGATCTATGCCATGTAATTcactatataaaaaaaatgtgttggcAGTTGAGGCAGTGTCAAAAGGGCCCTGAAATGAGAAGGCAACATATCTGCTCTATTTTGAAGACTTAAATGGTACAAGAACATGTAGTTGTAGGATTTATGGCTGAAATTAATCAGTTTCACTATACCAGCATTTCCTCAGTCTGCACAAAGCACATGCTATGCAGTAAATGGGAAGGAAGGACTAGGCTGGTTTCAAATTCAAGTTTAGATTTGCATTTTTAATAGGTTTTCTAAttgaaaatctatttaaattcagGTTCAATTGAACTGATTTGTGGCTAATATCCCTATAGTTTTCCGATTCAGTGCACACCCATGTTAAATGTCTTTATTTAACTTGTAGAGAAAATATGTTTGTATAGCTGGAATAAATTTCTCCATTCTATTCAATCAAAAAATGAAAGAAATTACCTTGTTGAATGAGATTTATAACCTCCATATTCACTAATATAAACATGATTCGTATCAA
>XM_036943108.1
TCGCTCAGCGGCGGTGTAGTCCGCCTGTTAGCCTTACAACTTAAACACGCCCAATGAGAGAATTGAAACAATTTTTTCTCGAAATCAGAAGACACTACCTAGATTCGAGGCAATGTCTTAAGTAgcggaacatgttattactccagcCTAATAAAAGTGACACGTTTTAATTTTCGTCAAAAACAACTATATCGAAGGAGTGTCTTTTTGAGGCATGCACAAGCACATTTCGGCGAGACGACCTTTAGACCCGGTGAACGTGTTTCTGCGCACGCGCCTAGCTAACCAACGTCGCAATGACATCGCCTACAACTTGATCAGGAAGAAGCAGTTACTGCATATCTTCATACTGTCTTTGGGATAAACCAGAGTCAAGAAGATGGCTGACACAGAGCAAACAagtgctcctcctccccctcaatTAGGGACAGTGCAATTCATGTTGGCTAACAAACTAGAGACGGCAATGTGGCTCTCGCGGCTCTTCACCGTCTATTGCTCAGTAATGTTCATTCTACCTCTCTTAGGACCTCAGGCGGCTGCCAATTTCTATCAGCGTGCGCTGCTGGCCAACGCACTCACCAGTGCTCTGCGGCTACACCAGCGGCTTCCTCACTTCCAGCTCAGCAGAGCCTTCCTAGCCCAGGCACTCCAAGAGGACAGCTGTCACTACCTGCTGTACTCCCTCATCCTGGTCAACTCTTACCCCATTACAATGAGCATATTCTCAGTCTTCCTCTTCTCATTGCTTCATGCAACCACCTACACAAAGAAGGTTCTTGACGCAATGGGCCCCAATAGCCTTCTCTTCATGAGGAACTTCCTCAACAAGCTCTCGGCCAACCAGCAGAACATCCTGAAGTTCATCGCCTGCAATGAGATCTTCCTCATGCCAGCCACCATATTCATGCTCTTCAGTGGCCAGGGAAGCTTGCTGCAGCCTTTCATTTACTACAGGTTTCTAACTCTCCGCTATACATCAAGGAGAAACCCATATTGCCGCACCCTATTCTCAGAGCTGCGGATTCTGCTGGAACATTTCGTCATGAAGCCCGCCTGCCCCGCCTTCTTCAGAAAGATGTGCCTCAACAGTATCTCCTTTATGAGCCGCCTGGCCCCCACCGCAGTGTGACCTTACTTCCTGTTCCCACACAACCATAGTTTGTACTGTAAGGGGCGTGGCAGCATTTCAACTCGAGCGGGATGGACGAACAACAACTTTGAGAGCAAGGGAAAAAACCTTTTGAatgttagtctggtctgtcttccTGCTGCTCTGTTCATACGCTACAGCGGAGGCTGAGGCTCGGACTGCGACGCACTGAAAACTGATTGTTTTCAATATGGCTTTATGGAACAGCCGAACACTcactcccccttttctctctcgctctctttgggAATAAACACCAGCTGACTATTTGATGTGTTCTACTTCTAAGGATTGACCTTGTGATGGTTAAATGTCTTTGTCATGGAAAATACTTGTTATCTTTAAATAAAATACTAACTTCTGAGATTAGATAGTTAAATTGTACTATACATCGTTGcagtcattttattttttttaatagccAAATATTGTGCTTTTCAAAGGCGATGTCGGTTgctctgtattttattttttacatccaCTAATTCCATTTTATGTGTTCTTTTTCTTACACGAAAAGCATTGGTTATGATTTTGTCTTAACACATTTCTACTCTTATGAATTTGAAAAGTGATCTATGCCATGTAATTcactatataaaaaaaatgtgttggcAGTTGAGGCAGTGTCAAAAGGGCCCTGAAATGAGAAGGCAACATATCTGCTCTATTTTGAAGACTTAAATGGTACAAGAACATGTAGTTGTAGGATTTATGGCTGAAATTAATCAGTTTCACTATACCAGCATTTCCTCAGTCTGCACAAAGCACATGCTATGCAGTAAATGGGAAGGAAGGACTAGGCTGGTTTCAAATTCAAGTTTAGATTTGCATTTTTAATAGGTTTTCTAAttgaaaatctatttaaattcagGTTCAATTGAACTGATTTGTGGCTAATATCCCTATAGTTTTCCGATTCAGTGCACACCCATGTTAAATGTCTTTATTTAACTTGTAGAGAAAATATGTTTGTATAGCTGGAATAAATTTCTCCATTCTATTCAATCAAAAAATGAAAGAAATTACCTTGTTGAATGAGATTTATAACCTCCATATTCACTAATATAAACATGATTCGTATCAA

Function

NR:

description
PREDICTED: transmembrane protein 33-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K20724 TMEM33; transmembrane protein 33

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021561443.2 False 2346 mRNA 0.42 8 19203778 19211564
XM_036943108.1 True 2240 mRNA 0.43 8 19203778 19211568

Neighbor

gene id symbol gene type direction distance location
bbs7 bbs7 coding downstream 156 19197524 ~ 19203622 (-)
LOC110488948 ccna2 coding downstream 8697 19190241 ~ 19195081 (-)
LOC110487747 anxa5 coding downstream 39434 19144130 ~ 19164344 (-)
LOC110488940 LOC106604535 coding downstream 429411 18584380 ~ 18774367 (-)
LOC110487745 NA coding downstream 960978 18240679 ~ 18242800 (-)
LOC118938702 NA coding upstream 12206 19223774 ~ 19239151 (-)
limch1b LOC106604545 coding upstream 71630 19283198 ~ 19429045 (-)
LOC118938704 NA coding upstream 509392 19720960 ~ 19722934 (-)
LOC110488956 LOC106604549 coding upstream 526639 19738207 ~ 19753902 (-)
LOC110488957 LOC100136484 coding upstream 544437 19756005 ~ 19771671 (-)
G1224308 LOC106613263 non-coding downstream 21833 19181622 ~ 19181945 (-)
G1224306 NA non-coding downstream 23833 19179605 ~ 19179945 (-)
G1224305 NA non-coding downstream 26168 19177004 ~ 19177610 (-)
G1224240 NA non-coding downstream 136453 19066584 ~ 19067325 (-)
G1224185 NA non-coding downstream 207975 18995459 ~ 18995803 (-)
G1224320 NA non-coding upstream 9099 19220667 ~ 19309671 (-)
G1224344 NA non-coding upstream 40837 19252405 ~ 19308550 (-)
G1224534 NA non-coding upstream 289030 19500598 ~ 19500829 (-)
G1224547 NA non-coding upstream 295441 19507009 ~ 19507209 (-)
G1224564 NA non-coding upstream 307511 19519079 ~ 19519366 (-)
asb5a LOC101464329 other downstream 1804543 17395671 ~ 17399280 (-)
G1219208 NA other downstream 3885618 15317793 ~ 15318160 (-)
G1218808 NA other downstream 4209399 14993820 ~ 14994379 (-)
LOC110488886 LOC106604622 other downstream 4646397 14542673 ~ 14642681 (-)
LOC110488853 LOC106604605 other downstream 5488901 13683784 ~ 13715500 (-)
G1225043 LOC108238713 other upstream 624310 19835878 ~ 19836319 (-)
G1225499 NA other upstream 922143 20133711 ~ 20134053 (-)
G1225505 upf3b other upstream 1110210 20321778 ~ 20325219 (-)
G1225647 LOC106604448 other upstream 1254162 20465730 ~ 20470523 (-)
G1225875 NA other upstream 1511469 20723037 ~ 20723236 (-)

Expression


Co-expression Network