trnae-uuc-6


Basic Information

Item Value
gene id trnae-uuc-6
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 20390094 ~ 20390165 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnae-uuc-6
tcccatatggtctagcggttaggattcctggttttcacccaggcgGCCCGGGTTCGACTCCCGGTATGGGAA

Function

NR:

description
uncharacterized protein LOC110437899

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-uuc-6 True 72 mRNA 0.56 1 20390094 20390165
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110488977 LOC106604447 coding upstream 9373 20375493 ~ 20380721 (+)
LOC110488975 LOC106604445 coding upstream 15238 20332797 ~ 20374856 (+)
LOC110488974 rl39 coding upstream 63202 20325337 ~ 20326892 (+)
LOC118938779 NA coding upstream 63877 20326089 ~ 20326217 (+)
upf3b upf3b coding upstream 64852 20316740 ~ 20325242 (+)
elf1 LOC106604448 coding downstream 568 20390733 ~ 20470536 (+)
pcdh19 LOC106604451 coding downstream 432878 20823043 ~ 20913221 (+)
glra4a LOC106604454 coding downstream 1720895 22111060 ~ 22190415 (+)
gla gla coding downstream 1829494 22219659 ~ 22227024 (+)
btk btk coding downstream 1843769 22233934 ~ 22254573 (+)
G1225242 LOC106604437 non-coding upstream 116414 20272029 ~ 20273680 (+)
G1225243 LOC106604437 non-coding upstream 119725 20264613 ~ 20270369 (+)
G1225300 NA non-coding upstream 152717 20237162 ~ 20237377 (+)
G1225297 NA non-coding upstream 166033 20223723 ~ 20224061 (+)
G1225338 NA non-coding downstream 7199 20397364 ~ 20397673 (+)
G1225394 NA non-coding downstream 136060 20526225 ~ 20545409 (+)
G1225725 NA non-coding downstream 207317 20597482 ~ 20597795 (+)
G1225752 NA non-coding downstream 237833 20627998 ~ 20628259 (+)
G1225755 NA non-coding downstream 238742 20628907 ~ 20629114 (+)
LOC110488973 nkap other upstream 75984 20308619 ~ 20314136 (+)
G1225174 NA other upstream 377617 20012015 ~ 20012477 (+)
G1225173 NA other upstream 378561 20011030 ~ 20011533 (+)
phox2bb phox2b other upstream 1109160 19279607 ~ 19282635 (+)
LOC110488935 LOC106604530 other upstream 2194086 18104635 ~ 18196487 (+)
G1225840 NA other downstream 305507 20695672 ~ 20696137 (+)
G1228466 LOC100136012 other downstream 2463150 22853315 ~ 22853661 (+)
shisa3 shisa3 other downstream 3226558 23616713 ~ 23622863 (+)
LOC110489020 LOC106609103 other downstream 4058135 24448300 ~ 24458335 (+)
G1231863 NA other downstream 5556547 25946712 ~ 25952747 (+)

Expression

trnae-uuc-6 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: -0.5 to 0.5.
End of interactive chart.

Co-expression Network