Item | Value |
---|---|
gene id | elf1 |
gene name | LOC106604448 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048578.1 |
NCBI id | CM023232.3 |
chromosome length | 43310081 |
location | 20390733 ~ 20470536 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
ETS-related transcription factor Elf-1-like isoform X2 |
id | description |
---|---|
K09428 | ELF1_2_4; E74-like factor 1/2/4 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021561490.2 | False | 6674 | mRNA | 0.45 | 9 | 20390733 | 20470536 |
XM_021561489.2 | False | 6585 | mRNA | 0.46 | 9 | 20410913 | 20470536 |
XM_021561491.2 | False | 6409 | mRNA | 0.46 | 9 | 20425083 | 20470536 |
XM_021561492.2 | True | 6076 | mRNA | 0.45 | 8 | 20446150 | 20470536 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
trnae-uuc-6 | NA | coding | upstream | 568 | 20390094 ~ 20390165 (+) |
LOC110488977 | LOC106604447 | coding | upstream | 10012 | 20375493 ~ 20380721 (+) |
LOC110488975 | LOC106604445 | coding | upstream | 15877 | 20332797 ~ 20374856 (+) |
LOC110488974 | rl39 | coding | upstream | 63841 | 20325337 ~ 20326892 (+) |
LOC118938779 | NA | coding | upstream | 64516 | 20326089 ~ 20326217 (+) |
pcdh19 | LOC106604451 | coding | downstream | 352507 | 20823043 ~ 20913221 (+) |
glra4a | LOC106604454 | coding | downstream | 1640524 | 22111060 ~ 22190415 (+) |
gla | gla | coding | downstream | 1749123 | 22219659 ~ 22227024 (+) |
btk | btk | coding | downstream | 1763398 | 22233934 ~ 22254573 (+) |
timm8a | timm8a | coding | downstream | 1784483 | 22255019 ~ 22256391 (+) |
G1225242 | LOC106604437 | non-coding | upstream | 117053 | 20272029 ~ 20273680 (+) |
G1225243 | LOC106604437 | non-coding | upstream | 120364 | 20264613 ~ 20270369 (+) |
G1225300 | NA | non-coding | upstream | 153356 | 20237162 ~ 20237377 (+) |
G1225297 | NA | non-coding | upstream | 166672 | 20223723 ~ 20224061 (+) |
G1225394 | NA | non-coding | downstream | 55689 | 20526225 ~ 20545409 (+) |
G1225725 | NA | non-coding | downstream | 126946 | 20597482 ~ 20597795 (+) |
G1225752 | NA | non-coding | downstream | 157462 | 20627998 ~ 20628259 (+) |
G1225755 | NA | non-coding | downstream | 158371 | 20628907 ~ 20629114 (+) |
G1225774 | NA | non-coding | downstream | 174157 | 20644693 ~ 20644910 (+) |
LOC110488973 | nkap | other | upstream | 76623 | 20308619 ~ 20314136 (+) |
G1225174 | NA | other | upstream | 378256 | 20012015 ~ 20012477 (+) |
G1225173 | NA | other | upstream | 379200 | 20011030 ~ 20011533 (+) |
phox2bb | phox2b | other | upstream | 1109799 | 19279607 ~ 19282635 (+) |
LOC110488935 | LOC106604530 | other | upstream | 2194725 | 18104635 ~ 18196487 (+) |
G1225840 | NA | other | downstream | 225136 | 20695672 ~ 20696137 (+) |
G1228466 | LOC100136012 | other | downstream | 2382779 | 22853315 ~ 22853661 (+) |
shisa3 | shisa3 | other | downstream | 3146187 | 23616713 ~ 23622863 (+) |
LOC110489020 | LOC106609103 | other | downstream | 3977764 | 24448300 ~ 24458335 (+) |
G1231863 | NA | other | downstream | 5476176 | 25946712 ~ 25952747 (+) |