Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110488995 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 22345297 ~ 22350882 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: THAP domain-containing protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002468507.2 | True | 324 | mRNA | 0.48 | 3 | 22345297 | 22350882 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mars2 | mars2 | coding | upstream | 71448 | 22263088 ~ 22273849 (+) |
| timm8a | timm8a | coding | upstream | 88906 | 22255019 ~ 22256391 (+) |
| btk | btk | coding | upstream | 90724 | 22233934 ~ 22254573 (+) |
| gla | gla | coding | upstream | 118273 | 22219659 ~ 22227024 (+) |
| glra4a | LOC106604454 | coding | upstream | 154882 | 22111060 ~ 22190415 (+) |
| LOC110487749 | LOC106604462 | coding | downstream | 550876 | 22901758 ~ 23256369 (+) |
| ky | ky | coding | downstream | 964066 | 23314948 ~ 23321657 (+) |
| LOC118938707 | NA | coding | downstream | 1222091 | 23572973 ~ 23573977 (+) |
| shisa3 | shisa3 | coding | downstream | 1265831 | 23616713 ~ 23622863 (+) |
| grxcr1a | grxcr1 | coding | downstream | 1474492 | 23825374 ~ 23830234 (+) |
| G1227740 | NA | non-coding | upstream | 7780 | 22337117 ~ 22337517 (+) |
| G1227703 | NA | non-coding | upstream | 68744 | 22275486 ~ 22276553 (+) |
| G1227697 | NA | non-coding | upstream | 78860 | 22266236 ~ 22266437 (+) |
| G1227658 | LOC106604455 | non-coding | upstream | 111902 | 22228022 ~ 22233395 (+) |
| G1227926 | NA | non-coding | downstream | 51976 | 22402858 ~ 22403195 (+) |
| G1227911 | LOC106604462 | non-coding | downstream | 83266 | 22434148 ~ 22437452 (+) |
| G1227969 | NA | non-coding | downstream | 123922 | 22474804 ~ 22476958 (+) |
| G1228143 | NA | non-coding | downstream | 373864 | 22724746 ~ 22793060 (+) |
| G1228162 | NA | non-coding | downstream | 399845 | 22750727 ~ 22751449 (+) |
| G1225840 | NA | other | upstream | 1649160 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 2031187 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 2332820 | 20012015 ~ 20012477 (+) |
| G1225173 | NA | other | upstream | 2333764 | 20011030 ~ 20011533 (+) |
| phox2bb | phox2b | other | upstream | 3064363 | 19279607 ~ 19282635 (+) |
| G1228466 | LOC100136012 | other | downstream | 502433 | 22853315 ~ 22853661 (+) |
| LOC110489020 | LOC106609103 | other | downstream | 2097418 | 24448300 ~ 24458335 (+) |
| G1231863 | NA | other | downstream | 3595830 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 3611575 | 25962457 ~ 25966312 (+) |
