Gene
RNA
| Item | Value |
|---|---|
| gene id | grxcr1a |
| gene name | grxcr1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 23825374 ~ 23830234 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| grxcr1 | Predicted to enable glutathione oxidoreductase activity. Predicted to be involved in inner ear receptor cell stereocilium organization; sensory perception of sound; and vestibular receptor cell development. Predicted to act upstream of or within inner ear auditory receptor cell differentiation and post-embryonic animal organ morphogenesis. Predicted to be located in microvillus. Predicted to be active in kinocilium and stereocilium. Implicated in autosomal recessive nonsyndromic deafness 25. |
| description |
|---|
| glutaredoxin domain-containing cysteine-rich protein 1-like |
| id | name | namespace |
|---|---|---|
| GO:0045454 | cell redox homeostasis | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0009055 | electron transfer activity | molecular_function |
| GO:0015035 | protein disulfide oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K17479 | GRXCR1; glutaredoxin domain-containing cysteine-rich protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021561544.2 | True | 1629 | mRNA | 0.43 | 3 | 23825374 | 23830234 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| shisa3 | shisa3 | coding | upstream | 202511 | 23616713 ~ 23622863 (+) |
| LOC118938707 | NA | coding | upstream | 251397 | 23572973 ~ 23573977 (+) |
| ky | ky | coding | upstream | 503717 | 23314948 ~ 23321657 (+) |
| LOC110487749 | LOC106604462 | coding | upstream | 569005 | 22901758 ~ 23256369 (+) |
| LOC110488995 | NA | coding | upstream | 1474492 | 22345297 ~ 22350882 (+) |
| LOC110489012 | znf518b | coding | downstream | 38334 | 23868568 ~ 23873598 (+) |
| LOC110489017 | fa55c | coding | downstream | 570249 | 24400483 ~ 24439204 (+) |
| LOC110489020 | LOC106609103 | coding | downstream | 621198 | 24448300 ~ 24458335 (+) |
| csn6 | cops6 | coding | downstream | 636453 | 24466687 ~ 24474857 (+) |
| gpc2 | gpc2 | coding | downstream | 708932 | 24539166 ~ 24551802 (+) |
| G1228903 | bend4 | non-coding | upstream | 211927 | 23612872 ~ 23613447 (+) |
| G1228900 | bend4 | non-coding | upstream | 216032 | 23608757 ~ 23609342 (+) |
| G1228899 | NA | non-coding | upstream | 216697 | 23608275 ~ 23608677 (+) |
| G1228897 | NA | non-coding | upstream | 227364 | 23595917 ~ 23598010 (+) |
| G1229061 | NA | non-coding | downstream | 6256 | 23836490 ~ 23839105 (+) |
| G1229788 | NA | non-coding | downstream | 183611 | 24013845 ~ 24014082 (+) |
| G1229823 | NA | non-coding | downstream | 201376 | 24031610 ~ 24031882 (+) |
| G1229883 | NA | non-coding | downstream | 244356 | 24074590 ~ 24075012 (+) |
| G1229884 | NA | non-coding | downstream | 245230 | 24075464 ~ 24076005 (+) |
| G1228466 | LOC100136012 | other | upstream | 971713 | 22853315 ~ 22853661 (+) |
| G1225840 | NA | other | upstream | 3129237 | 20695672 ~ 20696137 (+) |
| LOC110488973 | nkap | other | upstream | 3511264 | 20308619 ~ 20314136 (+) |
| G1225174 | NA | other | upstream | 3812897 | 20012015 ~ 20012477 (+) |
| G1231863 | NA | other | downstream | 2116478 | 25946712 ~ 25952747 (+) |
| G1231862 | LOC106604502 | other | downstream | 2132223 | 25962457 ~ 25966312 (+) |
| G1232217 | NA | other | downstream | 2325322 | 26155556 ~ 26156812 (+) |
| ube2d2 | UBE2D2 | other | downstream | 2869996 | 26699956 ~ 26711938 (+) |
