mcm7 (mcm7)


Basic Information

Item Value
gene id mcm7
gene name mcm7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 24481675 ~ 24495562 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021561566.2
CGCGTTTTGATTGGAGCACGCAGACGACAGACTCGCGCCAGTTTTTGCAGTTGGACCTCCAATTTGTTGTCTCCCAGTGCAGAAAGAAAATACattgttaaaaatatatatataataactgATAAGTTACTTAACACAGTGGGTTTAAGTAAAACCACATTACTCAACAATCATGGCTCCTAAGGATTACTTGGCTGAGAAAGAGAAATGCAAGAAGTTCCTTCAAGAGTTTTACAGTGAGGATGACAATGGAAAGAAGGTCTTCAAATATGGAGCTCAACTTGTTTCCCTGTCCCACAGGGAGCAGGTGGCTTTGCAAGTGGACCTGGACGATGTGGCCGAGGAGGACCCAGAGTTGGTGGAGAGCATCTGTGAAAATGCCAAACGCTACATGGGCCTGTTCGCTGATGCCGTCCACGAGCTGCTACCAGAGTACCGTGAGAGAGAGGTGGTGGCCAAGGATTCCCTGGATGTGTACATTGAGCATAGGCTGATGATGGAGCAGAGAGGTCACGACACCGCAGACACCAGGGATCCTCGCAACCAGTACCCAGCAGAGCTCATGAGGAGATTtgagcTCTACTTCAAACCGCCCAGCACTGCCAAACCCAAAGTGGTCCGTGATGTCCGTGCAGACAGCATTGGCCAGTTGGTGACCGTTAGGGGCATCGTGACCCGTGCCACTGAGGTCAAGCCCATGATGGCAGTTGCCACCTACACCTGTGACCAGTGTGGGGCAGAGACATACCAGCCGATTCAATCCCCCACATTCATGCCCCTCATCATGTGTCCCAGTCAAGAGTGTGTCACCAACAAGTCAGGCGGCCGCCTCTACCTGCAGACCCGAGGCTCAAAGTTTGTCAAGTTCCAGGAACTGCGCATACAGGAACACAGTGACCAGGTTCCTGTGGGAAACATCCCCCGGAGCATGACCATCTACACCCGCGGGGAGAACACACGCGTGGCCCAGCCCGGAGACCACGTGGCTATCTCCGGCGTCTTCCTCCCCCTGCTGCGTAATGGCTTCAGGCAGGCTGTCCAAgGTCTGCTTTCAGAGACGTACCTGGAGTCCCACGGCATCACTCTAATGAACAAGACTGAGGATGATGAGCTGGGCACAGCAGAGCTGAGTGAGGAAGAGCTGCGCCAGATCACAGAGGAAGATTTCTATGAGAAGCTTGCTGGCTCCATTGCCCCTGAGATTTTTGGTCATGAAGATGTGAAAAaggctctgctgctgctgctggttggaGGAGTGCAGCAGGCCCCCAAGGGTATGAAGATCAGAGGCAACATAAACATCTGTCTGATGGGAGACCCAGGAGTAGCTAAGTCCCAACTGCTGTCTTACATTGACCGCCTGGCTCCTCGCAGCCAGTATACAACGGGCCGAGGTTCCTCTGGCGTGGGCCTGACGGCAGCGGTGATGCGTGACCCTCTCACCGGGGAGATGACCCTGGAGGGCGGCGCACTGGTGCTGGCCGACCAGGGTGTCTGCTGCATCGACGAATTTGACAAGATGGCAGATGCCGATCGCACAGCCATCCACGAGGTGATGGAGCAGCAGACCATCTCCATTGCCAAGGCGGGCATCATGACCTCCCTCAACGCCCGCTGCTCCATCCTGGCGGCCGCCAACCCTGCCTATGGCCGCTACAACCCGCGAAAGACCATAGAGCAGAATATCCAGCTGCCAGCCGCCCTGCTCTCCCGTTTCGACCTGCTGTGGCTCATCCAGGACAAGCCTGACGCTGAGGCCGATCTCCGCCTGGCCCAGCACATCACCTATGTTCACCAGCACTGCCGCCAGCCACCCACTCACTTCACCCCCATCGATATGAAGCTCATGAGACGTTACATCTCCCTGTGTAAGAGGCGACAGCCCGTCATACCTGAGTCGCTGGCTGATTACATCACGGCAGCCTACGTGGAGATGAGGAAGGAGGCGCGTGTCAGCAAGGACTGTACCTTCACCTCCGCCCGTACACTCCTGTCCATCCTCCGCCTCTCCACTGCCCTGgcCCGTTTGCGGCTGGTGGATGTGGTGGAGAAAGAGGATGTGAACGAGGCGATGAGGCTCATGGAAATGTCCAAGGACTCCCTGCAGGCCGACAAGTCCAGCACCACCAGAGCCCATCGGCCAGCGGACGTGATCTTCTCCCTGCTGCGTGAGCTGGCCACGGAGGGTGTGAAGGGCCGGGGTGGGTCTGGGGGCCTGGTTCGCATGGCAGAGGCCGAACAGCGGTGTGTTTCCCGTGGCTTCACCCCTGCCCAGTTCCAGGAGGCCCTGGAGGAGTATGAGGAGCTCAACGTGTGGCAAGTCAACCAGGCCCGTACCCGCATCACCTTCGTCTAAAGCAGGGCTGTTTGATTCCAGTCCTagagggcctgaatactttctggtATTTAATTGTACTCAACTGGTGTCCCTGGTCTGAATTAGTCCCTGATTAGGAGGAGGGGatgaaaaccagaagtgtttcGGCACTCCAGGACTGACCTTGCGCCCCCTTCACCAGCCACAGGCCTTTTTCACCCAAACCCGGTCAAGGGCTATGCCTGTGACGAGATGCTTAATGGGCTGCTGACTGCGATGGGACCCCTTAGTGTGTCCCCATCTACGCCGTTACAACAAATAATTAAATGTAAACATGCATGGTGGTTCTTGGCTTTGTTTTGGAATGGTTAAATGTTGCTAACTTTTCTTCCTTGGCTATTAaatgcttttaaaaaaaatgttagatGGCTGCTCTCAAATAAAACTCTGTAAATACAA

Function

symbol description
mcm7 Predicted to enable single-stranded DNA binding activity. Predicted to contribute to single-stranded DNA helicase activity. Acts upstream of or within regulation of cilium assembly. Predicted to be part of MCM complex. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Orthologous to human MCM7 (minichromosome maintenance complex component 7).

NR:

description
DNA replication licensing factor MCM7 isoform X1

GO:

id name namespace
GO:0032508 DNA duplex unwinding biological_process
GO:0006270 DNA replication initiation biological_process
GO:0042555 MCM complex cellular_component
GO:0005634 nucleus cellular_component
GO:0005524 ATP binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003678 DNA helicase activity molecular_function

KEGG:

id description
K02210 MCM7, CDC47; DNA replication licensing factor MCM7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021561566.2 True 2776 mRNA 0.55 15 24481675 24495562

Neighbor

gene id symbol gene type direction distance location
LOC110489021 LOC106604492 coding downstream 2478 24476608 ~ 24479197 (-)
LOC110489019 LOC106604490 coding downstream 15702 24462595 ~ 24465973 (-)
bod1l1 LOC106604486 coding downstream 113625 24344340 ~ 24368050 (-)
nkx3-2 nkx3-2 coding downstream 146402 24333188 ~ 24335273 (-)
LOC110487753 rab28 coding downstream 158004 24226819 ~ 24323671 (-)
LOC110487755 LOC106604493 coding upstream 1818 24497380 ~ 24537328 (-)
LOC110489025 LOC106604425 coding upstream 61524 24556733 ~ 24561862 (-)
LOC110489023 LOC106604495 coding upstream 67827 24563389 ~ 24580537 (-)
LOC110489029 NA coding upstream 104137 24599526 ~ 24682015 (-)
LOC110489477 LOC106604496 coding upstream 210833 24706395 ~ 24709307 (-)
G1230515 fa55c non-coding downstream 48047 24426681 ~ 24433628 (-)
G1230541 NA non-coding downstream 68738 24412184 ~ 24412937 (-)
G1230539 NA non-coding downstream 70518 24410786 ~ 24411157 (-)
G1230535 NA non-coding downstream 75020 24406400 ~ 24406655 (-)
G1230517 NA non-coding downstream 77061 24399766 ~ 24404614 (-)
G1230576 NA non-coding upstream 37559 24533121 ~ 24533343 (-)
G1230587 NA non-coding upstream 43537 24539099 ~ 24539701 (-)
G1230590 NA non-coding upstream 48812 24544374 ~ 24544800 (-)
G1230591 NA non-coding upstream 50897 24546459 ~ 24546726 (-)
G1230592 NA non-coding upstream 52843 24548405 ~ 24548839 (-)
G1229693 znf518b other downstream 608111 23869958 ~ 23873564 (-)
LOC110488986 LOC106604455 other downstream 2248384 22228319 ~ 22233369 (-)
G1225875 NA other downstream 3758439 20723037 ~ 20723236 (-)
G1225647 LOC106604448 other downstream 4011152 20465730 ~ 20470523 (-)
G1225505 upf3b other downstream 4156456 20321778 ~ 20325219 (-)
G1232240 NA other upstream 1607784 26103346 ~ 26165403 (-)
kcnk4a LOC106604391 other upstream 2485148 26979968 ~ 26990318 (-)
G1233612 NA other upstream 2497231 26992793 ~ 26993184 (-)

Expression


Co-expression Network