LOC110487758 (LOC106604498)


Basic Information

Item Value
gene id LOC110487758
gene name LOC106604498
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 24904552 ~ 24906407 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021559665.2
ATGTACCATTTAGGCAAGAATCCCCAGAGGTCTGATTACAAGACCGTGGTACAGAGGTCAGTGTCTGACCAATTCCACCCAGGAGAAAATGTGACTCTGCAGTGTACAGTGCTCTCTGAGGCCTGTACAGGAGAACACAGTGTGTACTGGTTCAGAATTGGATCAGGAGAATCCCATCCAGGAGTCATTTACACCCCTGGAAACAGGAGAGATGAGTGTGAGAAGAGCCCTGAGACTCCTTCTCCTACACAGAGCTGTGTCTACAGCCTCTCCAAGAACAACCTCAGCCCCCCTGATGCTGGGACTTACTACTGTGCTGTGGCCATATGTGGGGAGATCCTTTTTGGCAAAGGAACAGAATTGGACCTGGCCAGTAACACGGAGGTGAATGTGTCAGAAATGGCTCTGGTAGTGGTTGTTGTAGGTTTGACAGTGGCGTTGGTGTTGTGTGGGATTGGGATCATGTTCCTTGTCTGCACCAGACCAAAAGAGCAAATCTGTGAAAATTGCAAAGCAGTGGGTGCCTCTCAGGTTGGCAGACAAGACAGATTACGTGGAGAAGAGGATCAAGATGGAGATACGTTGAATTATGCTGCATTGAATTTCTCTGAGAAGAAAActaaaagagggagaaagaagagagagacaccacaggagaGTGTGTACTCTGATGTCAGGTGTTAAGGCTAGGACGAACTTAGCTTAATCATTCTAAAATGTAGTGTTAATAATACATTTGTCTTTTAAATGTATTAGTCAGTGCCCCTTGTACAAAGATAATTAGAAAATATGAGAATTTGACAAATGTAATAAATGTTTGATAAAAATCATGATCAATCAGAACACAAATTAACAAATTGAAA

Function

NR:

description
uncharacterized protein LOC110487758

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021559665.2 True 863 mRNA 0.43 4 24904552 24906407

Neighbor

gene id symbol gene type direction distance location
LOC110489031 NA coding downstream 30886 24871941 ~ 24873666 (-)
LOC118938708 LOC106604508 coding downstream 40064 24862944 ~ 24864488 (-)
LOC110489477 LOC106604496 coding downstream 195281 24706395 ~ 24709307 (-)
LOC110489029 NA coding downstream 223125 24599526 ~ 24682015 (-)
LOC110489023 LOC106604495 coding downstream 324015 24563389 ~ 24580537 (-)
LOC118938754 NA coding upstream 627664 25534071 ~ 25534394 (-)
LOC110489032 LOC106604502 coding upstream 690964 25597371 ~ 25979494 (-)
LOC118938709 NA coding upstream 1663787 26570194 ~ 26586161 (-)
trnaa-agc-5 NA coding upstream 1692501 26598908 ~ 26598980 (-)
LOC100136335 ddit4l coding upstream 1724473 26630880 ~ 26633219 (-)
G1230669 NA non-coding downstream 146952 24712666 ~ 24757600 (-)
G1230609 NA non-coding downstream 189080 24606138 ~ 24715472 (-)
G1230781 NA non-coding upstream 12307 24918714 ~ 24919016 (-)
G1230836 NA non-coding upstream 40065 24946472 ~ 24999719 (-)
G1230863 NA non-coding upstream 75559 24981966 ~ 24985703 (-)
G1230835 NA non-coding upstream 82205 24988612 ~ 25003124 (-)
G1230874 NA non-coding upstream 102059 25008466 ~ 25008740 (-)
LOC110489025 LOC106604425 other downstream 342690 24556733 ~ 24561862 (-)
G1229693 znf518b other downstream 1030988 23869958 ~ 23873564 (-)
LOC110488986 LOC106604455 other downstream 2671261 22228319 ~ 22233369 (-)
G1225875 NA other downstream 4181316 20723037 ~ 20723236 (-)
G1232240 NA other upstream 1196939 26103346 ~ 26165403 (-)
kcnk4a LOC106604391 other upstream 2074303 26979968 ~ 26990318 (-)
G1233612 NA other upstream 2086386 26992793 ~ 26993184 (-)
si:dkeyp-115e12.6 LOC106604388 other upstream 2094309 26995966 ~ 27001492 (-)
G1234483 NA other upstream 3140171 28046578 ~ 28050952 (-)

Expression


Co-expression Network