Gene
RNA
| Item | Value |
|---|---|
| gene id | ppp3cb |
| gene name | LOC106604405 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 26653944 ~ 26698216 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform-like |
| id | description |
|---|---|
| K04348 | PPP3C, CNA; serine/threonine-protein phosphatase 2B catalytic subunit |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036943189.1 | False | 2520 | mRNA | 0.52 | 13 | 26653944 | 26698216 |
| XM_036943188.1 | False | 2342 | mRNA | 0.50 | 14 | 26653945 | 26697323 |
| XM_036943190.1 | False | 2024 | mRNA | 0.50 | 13 | 26653946 | 26678863 |
| XM_036943187.1 | True | 2564 | mRNA | 0.52 | 14 | 26653946 | 26698214 |
26,630,000
26,640,000
26,650,000
26,660,000
26,670,000
26,680,000
26,690,000
26,700,000
26,710,000
26,720,000
NC_048578.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487764 | tmem173 | coding | downstream | 8546 | 26638079 ~ 26686596 (-) |
| LOC100136335 | ddit4l | coding | downstream | 20725 | 26630880 ~ 26633219 (-) |
| trnaa-agc-5 | NA | coding | downstream | 54964 | 26598908 ~ 26598980 (-) |
| LOC118938709 | NA | coding | downstream | 67783 | 26570194 ~ 26586161 (-) |
| LOC110489032 | LOC106604502 | coding | downstream | 674450 | 25597371 ~ 25979494 (-) |
| LOC110489087 | LOC106604401 | coding | upstream | 33515 | 26731731 ~ 26739466 (-) |
| LOC110489085 | LOC106604399 | coding | upstream | 107899 | 26806115 ~ 26812021 (-) |
| eif1ad | eif1ad | coding | upstream | 175571 | 26873787 ~ 26881883 (-) |
| LOC110489081 | ctsw | coding | upstream | 183758 | 26881974 ~ 26895184 (-) |
| kcnk4a | LOC106604391 | coding | upstream | 281752 | 26979968 ~ 26990318 (-) |
| G1233344 | NA | non-coding | downstream | 31279 | 26616190 ~ 26622665 (-) |
| G1233332 | NA | non-coding | downstream | 60585 | 26593132 ~ 26593359 (-) |
| G1233331 | NA | non-coding | downstream | 61268 | 26592348 ~ 26592676 (-) |
| G1233323 | NA | non-coding | downstream | 70428 | 26583236 ~ 26583516 (-) |
| G1232809 | NA | non-coding | downstream | 89362 | 26564366 ~ 26564582 (-) |
| G1233386 | ube2d1 | non-coding | upstream | 2132 | 26700348 ~ 26711928 (-) |
| G1233417 | NA | non-coding | upstream | 52579 | 26750795 ~ 26751013 (-) |
| G1233450 | NA | non-coding | upstream | 98208 | 26796424 ~ 26798302 (-) |
| G1233440 | NA | non-coding | upstream | 102449 | 26800665 ~ 26804163 (-) |
| G1232240 | NA | other | downstream | 488541 | 26103346 ~ 26165403 (-) |
| LOC110489477 | LOC106604496 | other | downstream | 1944637 | 24706395 ~ 24709307 (-) |
| LOC110489025 | LOC106604425 | other | downstream | 2092082 | 24556733 ~ 24561862 (-) |
| G1229693 | znf518b | other | downstream | 2780380 | 23869958 ~ 23873564 (-) |
| LOC110488986 | LOC106604455 | other | downstream | 4420653 | 22228319 ~ 22233369 (-) |
| G1233612 | NA | other | upstream | 294577 | 26992793 ~ 26993184 (-) |
| si:dkeyp-115e12.6 | LOC106604388 | other | upstream | 302500 | 26995966 ~ 27001492 (-) |
| G1234483 | NA | other | upstream | 1348362 | 28046578 ~ 28050952 (-) |
| med7 | med7 | other | upstream | 1434724 | 28132248 ~ 28134104 (-) |
