Item | Value |
---|---|
gene id | acsl4a |
gene name | LOC106604299 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048578.1 |
NCBI id | CM023232.3 |
chromosome length | 43310081 |
location | 31295029 ~ 31309150 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
long-chain-fatty-acid--CoA ligase 4-like isoform X2 |
id | description |
---|---|
K01897 | ACSL, fadD; long-chain acyl-CoA synthetase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021561706.2 | False | 2887 | mRNA | 0.52 | 14 | 31295029 | 31309150 |
XM_036943309.1 | False | 2801 | mRNA | 0.52 | 14 | 31296398 | 31309150 |
XM_021561704.2 | False | 3093 | mRNA | 0.52 | 14 | 31296434 | 31309150 |
XM_021561707.2 | False | 3066 | mRNA | 0.52 | 14 | 31296434 | 31309150 |
XM_021561708.2 | True | 3077 | mRNA | 0.52 | 14 | 31296435 | 31309150 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
pin4 | pin4 | coding | upstream | 246 | 31288367 ~ 31294783 (+) |
LOC110489117 | LOC106604307 | coding | upstream | 80883 | 31211897 ~ 31214146 (+) |
LOC110489481 | LOC106604306 | coding | upstream | 108557 | 31183746 ~ 31186472 (+) |
LOC110489115 | LOC106604296 | coding | upstream | 127683 | 31145347 ~ 31167346 (+) |
LOC110489112 | LOC106604293 | coding | upstream | 280403 | 31001910 ~ 31014626 (+) |
psmd10 | psd10 | coding | downstream | 8995 | 31318145 ~ 31321534 (+) |
LOC110489126 | LOC106604301 | coding | downstream | 16865 | 31326015 ~ 31332941 (+) |
stag2b | LOC106604302 | coding | downstream | 28752 | 31337902 ~ 31380553 (+) |
LOC110489129 | LOC105024434 | coding | downstream | 88558 | 31397708 ~ 31532924 (+) |
LOC118938720 | NA | coding | downstream | 368653 | 31677803 ~ 31699448 (+) |
G1236893 | NA | non-coding | upstream | 2790 | 31291959 ~ 31292239 (+) |
G1236931 | NA | non-coding | upstream | 32251 | 31261479 ~ 31262778 (+) |
G1236864 | NA | non-coding | upstream | 138970 | 31155596 ~ 31156059 (+) |
LOC118938718 | LOC106604294 | non-coding | upstream | 293297 | 30998153 ~ 31001849 (+) |
G1236773 | NA | non-coding | upstream | 305580 | 30989100 ~ 30989449 (+) |
G1236950 | NA | non-coding | downstream | 3857 | 31313007 ~ 31313555 (+) |
G1236958 | NA | non-coding | downstream | 46005 | 31355155 ~ 31359847 (+) |
G1236959 | NA | non-coding | downstream | 46598 | 31355748 ~ 31356307 (+) |
G1236961 | NA | non-coding | downstream | 51190 | 31360340 ~ 31360779 (+) |
G1236998 | NA | non-coding | downstream | 108361 | 31417511 ~ 31418158 (+) |
G1236704 | LOC106612150 | other | upstream | 407878 | 30882949 ~ 30887151 (+) |
G1236717 | NA | other | upstream | 430542 | 30864051 ~ 30864487 (+) |
G1235511 | NA | other | upstream | 1645986 | 29646994 ~ 29649043 (+) |
G1235231 | NA | other | upstream | 2233106 | 29060648 ~ 29061923 (+) |
zgc:66447 | LOC106604327 | other | downstream | 1081665 | 32379198 ~ 32397869 (+) |
G1239015 | NA | other | downstream | 2469328 | 33773304 ~ 33799267 (+) |
G1241074 | NA | other | downstream | 3971201 | 35280351 ~ 35280667 (+) |
G1241386 | NA | other | downstream | 4497251 | 35806401 ~ 35807149 (+) |
G1241466 | NA | other | downstream | 4716948 | 36026098 ~ 36033170 (+) |