Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110489137 |
| gene name | LOC106612186 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 31741516 ~ 31835950 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110489137 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036943324.1 | False | 2545 | mRNA | 0.49 | 11 | 31741516 | 31778718 |
| XM_036943316.1 | False | 5091 | mRNA | 0.53 | 15 | 31741516 | 31835861 |
| XM_036943315.1 | False | 4904 | mRNA | 0.54 | 15 | 31741516 | 31835950 |
| XM_036943317.1 | False | 4838 | mRNA | 0.54 | 14 | 31741516 | 31835950 |
| XM_036943319.1 | False | 4814 | mRNA | 0.54 | 14 | 31741516 | 31835950 |
| XM_036943321.1 | False | 4927 | mRNA | 0.54 | 15 | 31741516 | 31835950 |
| XM_036943322.1 | False | 4568 | mRNA | 0.53 | 14 | 31741516 | 31835950 |
| XM_036943320.1 | False | 4172 | mRNA | 0.56 | 16 | 31742316 | 31835950 |
| XM_036943318.1 | False | 4943 | mRNA | 0.53 | 15 | 31742657 | 31835950 |
| XM_036943323.1 | True | 4471 | mRNA | 0.55 | 13 | 31752777 | 31835950 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489134 | LOC106604270 | coding | downstream | 18045 | 31720562 ~ 31723471 (-) |
| cuedc2 | cuedc2 | coding | downstream | 22600 | 31716123 ~ 31718916 (-) |
| LOC118938762 | NA | coding | downstream | 25548 | 31713691 ~ 31715968 (-) |
| LOC110487780 | LOC106604268 | coding | downstream | 40611 | 31680160 ~ 31700905 (-) |
| LOC110489130 | LOC106604267 | coding | downstream | 63658 | 31646037 ~ 31677858 (-) |
| si:ch211-153b23.7 | LOC106604275 | coding | upstream | 23316 | 31859266 ~ 31869975 (-) |
| LOC110489151 | LOC106604257 | coding | upstream | 735184 | 32571134 ~ 32573704 (-) |
| LOC110489150 | LOC106604256 | coding | upstream | 741226 | 32577176 ~ 32610818 (-) |
| LOC110489154 | NA | coding | upstream | 869472 | 32705422 ~ 32714985 (-) |
| LOC110489153 | LOC106604217 | coding | upstream | 896672 | 32732622 ~ 32739363 (-) |
| G1237956 | NA | non-coding | downstream | 1594 | 31739261 ~ 31739922 (-) |
| G1237951 | NA | non-coding | downstream | 4296 | 31733490 ~ 31737220 (-) |
| G1237978 | NA | non-coding | downstream | 17273 | 31724042 ~ 31724243 (-) |
| G1237992 | NA | non-coding | upstream | 16006 | 31851956 ~ 31852328 (-) |
| G1238023 | NA | non-coding | upstream | 72805 | 31908755 ~ 31922114 (-) |
| G1238034 | NA | non-coding | upstream | 93393 | 31929343 ~ 31929661 (-) |
| G1238049 | NA | non-coding | upstream | 114960 | 31950910 ~ 31951290 (-) |
| G1238155 | NA | non-coding | upstream | 307055 | 32143005 ~ 32147870 (-) |
| G1237388 | LOC106604302 | other | downstream | 378834 | 31350043 ~ 31362682 (-) |
| LOC118938717 | LOC105024420 | other | downstream | 791628 | 30912876 ~ 30992444 (-) |
| G1237075 | LOC106612148 | other | downstream | 967770 | 30768947 ~ 30773746 (-) |
| G1236423 | NA | other | downstream | 1438323 | 30298624 ~ 30303193 (-) |
| LOC110487772 | LOC106612141 | other | downstream | 1470062 | 30143782 ~ 30271667 (-) |
| G1238232 | LOC106604321 | other | upstream | 481306 | 32317256 ~ 32318058 (-) |
| G1238233 | LOC106604321 | other | upstream | 484068 | 32320018 ~ 32324555 (-) |
| G1238344 | NA | other | upstream | 560811 | 32396761 ~ 32399179 (-) |
| G1238347 | NA | other | upstream | 564463 | 32400413 ~ 32400900 (-) |
| G1238363 | LOC106612212 | other | upstream | 592042 | 32427992 ~ 32429975 (-) |
