Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110489150 |
| gene name | LOC106604256 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 32577176 ~ 32610818 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036943334.1 | False | 5114 | mRNA | 0.53 | 12 | 32577176 | 32610818 |
| XM_036943335.1 | False | 5218 | mRNA | 0.52 | 12 | 32577176 | 32610818 |
| TU1414117 | False | 1651 | TUCP | 0.49 | 1 | 32577297 | 32578947 |
| TU1414118 | True | 481 | lncRNA | 0.43 | 2 | 32602755 | 32610765 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489151 | LOC106604257 | coding | downstream | 3472 | 32571134 ~ 32573704 (-) |
| si:ch211-153b23.7 | LOC106604275 | coding | downstream | 707201 | 31859266 ~ 31869975 (-) |
| LOC110489137 | LOC106612186 | coding | downstream | 741226 | 31741516 ~ 31835950 (-) |
| LOC118938722 | NA | coding | downstream | 820373 | 31754266 ~ 31756803 (-) |
| LOC110489134 | LOC106604270 | coding | downstream | 853705 | 31720562 ~ 31723471 (-) |
| LOC110489154 | NA | coding | upstream | 94604 | 32705422 ~ 32714985 (-) |
| LOC110489153 | LOC106604217 | coding | upstream | 121804 | 32732622 ~ 32739363 (-) |
| LOC110489155 | LOC106604251 | coding | upstream | 130684 | 32741502 ~ 32743616 (-) |
| LOC110489157 | LOC106604249 | coding | upstream | 148064 | 32758882 ~ 32766211 (-) |
| LOC110489159 | LOC106612194 | coding | upstream | 216491 | 32827309 ~ 32841094 (-) |
| G1238455 | NA | non-coding | downstream | 18158 | 32558675 ~ 32559018 (-) |
| G1238454 | NA | non-coding | downstream | 18666 | 32557194 ~ 32558510 (-) |
| G1238453 | NA | non-coding | downstream | 19570 | 32557078 ~ 32557606 (-) |
| G1238437 | NA | non-coding | downstream | 29398 | 32547556 ~ 32547778 (-) |
| G1238435 | NA | non-coding | downstream | 37832 | 32538977 ~ 32539344 (-) |
| G1239104 | NA | non-coding | upstream | 9990 | 32620808 ~ 32621026 (-) |
| G1239107 | NA | non-coding | upstream | 13125 | 32623943 ~ 32624344 (-) |
| G1239108 | NA | non-coding | upstream | 14736 | 32625554 ~ 32626000 (-) |
| G1239118 | NA | non-coding | upstream | 36291 | 32647109 ~ 32647370 (-) |
| G1239135 | NA | non-coding | upstream | 104694 | 32715512 ~ 32715736 (-) |
| G1238363 | LOC106612212 | other | downstream | 147201 | 32427992 ~ 32429975 (-) |
| G1238347 | NA | other | downstream | 176276 | 32400413 ~ 32400900 (-) |
| G1238344 | NA | other | downstream | 177997 | 32396761 ~ 32399179 (-) |
| G1238233 | LOC106604321 | other | downstream | 252621 | 32320018 ~ 32324555 (-) |
| G1238232 | LOC106604321 | other | downstream | 259118 | 32317256 ~ 32318058 (-) |
| G1239090 | ogt | other | upstream | 85058 | 32695876 ~ 32696402 (-) |
| LOC110489172 | LOC106604229 | other | upstream | 1677764 | 34288581 ~ 34292245 (-) |
| G1240399 | NA | other | upstream | 1727005 | 34337823 ~ 34342891 (-) |
| G1240533 | NA | other | upstream | 2030674 | 34641492 ~ 34642037 (-) |
| G1240534 | NA | other | upstream | 2032317 | 34643135 ~ 34644152 (-) |
| G1239079 | LOC100194703 | non-coding | downstream | 6815 | 32595678 ~ 32595940 (-) |
| LOC110489150 | LOC106604256 | other | downstream | 23808 | 32577176 ~ 32610818 (-) |
