Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110489172 |
| gene name | LOC106604229 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 34288581 ~ 34292245 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cytochrome b-c1 complex subunit 8-like |
| id | name | namespace |
|---|---|---|
| GO:1902600 | proton transmembrane transport | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0008121 | ubiquinol-cytochrome-c reductase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021561787.2 | False | 535 | mRNA | 0.43 | 3 | 34288581 | 34292075 |
| XM_021561786.2 | False | 498 | mRNA | 0.46 | 3 | 34288582 | 34292245 |
| TU1415639 | True | 423 | TUCP | 0.47 | 3 | 34288582 | 34292170 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487784 | LOC106604228 | coding | downstream | 1515 | 34269309 ~ 34287066 (-) |
| gnpi | gnpi | coding | downstream | 19761 | 34263847 ~ 34268820 (-) |
| n4wbp5 | n4wbp5 | coding | downstream | 24787 | 34255786 ~ 34263794 (-) |
| LOC110489168 | LOC106604222 | coding | downstream | 120138 | 34134615 ~ 34168443 (-) |
| sh3rf2 | LOC106604221 | coding | downstream | 217007 | 34027010 ~ 34071574 (-) |
| LOC110489166 | LOC106604233 | coding | upstream | 1948 | 34294193 ~ 34297670 (-) |
| LOC118938726 | NA | coding | upstream | 150095 | 34441064 ~ 34443131 (-) |
| LOC110487787 | sfxn1 | coding | upstream | 294421 | 34586666 ~ 34618931 (-) |
| LOC110489177 | pp2aa | coding | upstream | 330385 | 34622630 ~ 34627670 (-) |
| ccdc69 | LOC106604205 | coding | upstream | 591146 | 34883391 ~ 34904800 (-) |
| G1240368 | NA | non-coding | downstream | 37724 | 34250546 ~ 34250857 (-) |
| G1240363 | NA | non-coding | downstream | 65144 | 34222797 ~ 34223437 (-) |
| G1240362 | NA | non-coding | downstream | 66320 | 34221064 ~ 34222261 (-) |
| G1240355 | NA | non-coding | downstream | 73932 | 34213868 ~ 34214649 (-) |
| G1240379 | NA | non-coding | upstream | 30475 | 34322720 ~ 34325156 (-) |
| G1240395 | NA | non-coding | upstream | 37505 | 34329750 ~ 34330550 (-) |
| G1240402 | NA | non-coding | upstream | 58722 | 34350967 ~ 34351178 (-) |
| G1240406 | NA | non-coding | upstream | 67334 | 34359579 ~ 34359844 (-) |
| G1239090 | ogt | other | downstream | 1592179 | 32695876 ~ 32696402 (-) |
| LOC110489150 | LOC106604256 | other | downstream | 1709634 | 32577176 ~ 32610818 (-) |
| G1238363 | LOC106612212 | other | downstream | 1858606 | 32427992 ~ 32429975 (-) |
| G1238347 | NA | other | downstream | 1887681 | 32400413 ~ 32400900 (-) |
| G1238344 | NA | other | downstream | 1889402 | 32396761 ~ 32399179 (-) |
| G1240399 | NA | other | upstream | 45578 | 34337823 ~ 34342891 (-) |
| G1240533 | NA | other | upstream | 349247 | 34641492 ~ 34642037 (-) |
| G1240534 | NA | other | upstream | 350890 | 34643135 ~ 34644152 (-) |
| G1240963 | NA | other | upstream | 769678 | 35061923 ~ 35062319 (-) |
| G1240953 | NA | other | upstream | 815583 | 35107828 ~ 35125496 (-) |
