Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110510782 |
| gene name | mid2 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 36145477 ~ 36379262 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mid2 | Predicted to enable zinc ion binding activity. Predicted to be located in cytoplasm and microtubule. Is expressed in brain; female organism; ovary; and testis. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability 101. Orthologous to human MID2 (midline 2). |
| description |
|---|
| PREDICTED: probable E3 ubiquitin-protein ligase MID2 isoform X2 |
| id | name | namespace |
|---|---|---|
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K10647 | TRIM1, MID2; midline 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036943474.1 | False | 3120 | mRNA | 0.53 | 10 | 36145477 | 36298971 |
| XM_036943472.1 | False | 3187 | mRNA | 0.53 | 11 | 36145477 | 36298972 |
| XM_036943473.1 | True | 3219 | mRNA | 0.53 | 11 | 36145477 | 36379262 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489193 | peam3 | coding | downstream | 71375 | 36043082 ~ 36074102 (-) |
| LOC110489191 | LOC106604152 | coding | downstream | 167710 | 35943307 ~ 35977767 (-) |
| LOC100305133 | LOC106604149 | coding | downstream | 208165 | 35895251 ~ 35937312 (-) |
| gpr137 | g137a | coding | downstream | 265241 | 35868806 ~ 35880236 (-) |
| LOC110489483 | LOC106604145 | coding | downstream | 382356 | 35733878 ~ 35763121 (-) |
| LOC110489226 | LOC106604165 | coding | upstream | 1262592 | 37641854 ~ 37688173 (-) |
| LOC110489227 | NA | coding | upstream | 1321558 | 37700820 ~ 37745238 (-) |
| LOC110489228 | ef-1g | coding | upstream | 1404040 | 37783302 ~ 37802457 (-) |
| LOC118938777 | NA | coding | upstream | 1420810 | 37800072 ~ 37800148 (-) |
| rpb7 | rpb7 | coding | upstream | 1424326 | 37803588 ~ 37810500 (-) |
| G1241898 | NA | non-coding | downstream | 82829 | 36062040 ~ 36062648 (-) |
| G1241897 | NA | non-coding | downstream | 95540 | 36046412 ~ 36049937 (-) |
| G1241879 | NA | non-coding | downstream | 119707 | 36023916 ~ 36025770 (-) |
| G1241868 | NA | non-coding | downstream | 122029 | 36022599 ~ 36023448 (-) |
| G1241878 | NA | non-coding | downstream | 123114 | 36022070 ~ 36022363 (-) |
| G1242061 | NA | non-coding | upstream | 9330 | 36388592 ~ 36389605 (-) |
| G1242079 | NA | non-coding | upstream | 24660 | 36403922 ~ 36405635 (-) |
| G1242184 | NA | non-coding | upstream | 57848 | 36437110 ~ 36439482 (-) |
| G1242164 | NA | non-coding | upstream | 78442 | 36457704 ~ 36502009 (-) |
| G1242196 | NA | non-coding | upstream | 82198 | 36461460 ~ 36463370 (-) |
| matr3l1.1 | LOC106604139 | other | downstream | 556484 | 35578460 ~ 35589383 (-) |
| G1241697 | NA | other | downstream | 626147 | 35517777 ~ 35519330 (-) |
| G1240953 | NA | other | downstream | 1019981 | 35107828 ~ 35125496 (-) |
| G1240963 | NA | other | downstream | 1083158 | 35061923 ~ 35062319 (-) |
| G1240534 | NA | other | downstream | 1501325 | 34643135 ~ 34644152 (-) |
| G1242169 | NA | other | upstream | 36716 | 36415978 ~ 36418075 (-) |
| G1243234 | NA | other | upstream | 1066507 | 37445769 ~ 37446210 (-) |
| G1243718 | NA | other | upstream | 1393369 | 37772631 ~ 37773270 (-) |
| G1244197 | NA | other | upstream | 2121425 | 38500687 ~ 38500999 (-) |
| G1244755 | LOC106604128 | other | upstream | 2470384 | 38824503 ~ 38852543 (-) |
