Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938777 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 37800072 ~ 37800148 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005036034.1 | True | 77 | mRNA | 0.30 | 1 | 37800072 | 37800148 |
37,797,600
37,797,800
37,798,000
37,798,200
37,798,400
37,798,600
37,798,800
37,799,000
37,799,200
37,799,400
37,799,600
37,799,800
37,800,000
37,800,200
37,800,400
37,800,600
37,800,800
37,801,000
37,801,200
37,801,400
37,801,600
37,801,800
NC_048578.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489227 | NA | coding | downstream | 54834 | 37700820 ~ 37745238 (-) |
| LOC110489226 | LOC106604165 | coding | downstream | 111899 | 37641854 ~ 37688173 (-) |
| LOC110510782 | mid2 | coding | downstream | 1420810 | 36145477 ~ 36379262 (-) |
| LOC110489193 | peam3 | coding | downstream | 1725970 | 36043082 ~ 36074102 (-) |
| LOC110489191 | LOC106604152 | coding | downstream | 1822305 | 35943307 ~ 35977767 (-) |
| rpb7 | rpb7 | coding | upstream | 3440 | 37803588 ~ 37810500 (-) |
| LOC118938731 | NA | coding | upstream | 10521 | 37810669 ~ 37825003 (-) |
| LOC110489484 | LOC106604167 | coding | upstream | 260217 | 38060365 ~ 38069359 (-) |
| LOC110489233 | ctnna1 | coding | upstream | 943942 | 38744090 ~ 38968665 (-) |
| LOC118938733 | NA | coding | upstream | 946876 | 38747024 ~ 38748988 (-) |
| G1243666 | NA | non-coding | downstream | 17959 | 37781863 ~ 37782113 (-) |
| G1243722 | NA | non-coding | downstream | 18653 | 37781154 ~ 37781419 (-) |
| G1243706 | NA | non-coding | downstream | 45089 | 37754588 ~ 37754983 (-) |
| G1243705 | NA | non-coding | downstream | 45925 | 37753923 ~ 37754147 (-) |
| G1243704 | NA | non-coding | downstream | 46473 | 37753145 ~ 37753599 (-) |
| G1243751 | NA | non-coding | upstream | 99455 | 37899603 ~ 37900006 (-) |
| G1243752 | NA | non-coding | upstream | 99934 | 37900082 ~ 37904820 (-) |
| G1243775 | NA | non-coding | upstream | 151348 | 37951496 ~ 37951829 (-) |
| G1243779 | NA | non-coding | upstream | 165678 | 37965826 ~ 37966229 (-) |
| G1243758 | NA | non-coding | upstream | 187457 | 37987605 ~ 37990303 (-) |
| G1243718 | NA | other | downstream | 26802 | 37772631 ~ 37773270 (-) |
| G1243234 | NA | other | downstream | 353862 | 37445769 ~ 37446210 (-) |
| G1242169 | NA | other | downstream | 1381997 | 36415978 ~ 36418075 (-) |
| matr3l1.1 | LOC106604139 | other | downstream | 2211079 | 35578460 ~ 35589383 (-) |
| G1241697 | NA | other | downstream | 2280742 | 35517777 ~ 35519330 (-) |
| G1244197 | NA | other | upstream | 700539 | 38500687 ~ 38500999 (-) |
| G1244755 | LOC106604128 | other | upstream | 1049498 | 38824503 ~ 38852543 (-) |
| G1244972 | rnf44 | other | upstream | 1485506 | 39285654 ~ 39298246 (-) |
| G1245005 | NA | other | upstream | 1622711 | 39422859 ~ 39424565 (-) |
| G1246021 | NA | other | upstream | 2868427 | 40668575 ~ 40669571 (-) |
