XLOC_003114 (mkrn2os.2)


Basic Information

Item Value
gene id XLOC_003114
gene name mkrn2os.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 583142 ~ 589128 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006154
ggtttccagcattcttcaaactatcttcttttgtcttctacagaaaacagaaacacaaacaggtttggaagaagCGAAGGGTGAGTACATGGAGACAGAATGTTGACTGCGAATatccttttaaagggatagttcaccccaaaaaatactcactatttactcgcaGTCAAGTGCTTTCAAacccttatgagtttctttctcctgttggaaacaaaagaagatattttgaaaaaggttAGAAAGATTTAGAACCATTACCATAGACAGTAGAAAcgacaaatacaatggaagtcaatggttacaggttttcagcaccGGATGAAGTGAATGACGACAGTGTTAGCTATGGATTTGGAAATGATATCGGTGTTTTTCCAGCTTCTCTCAGCAGCAGCACGTGAGCTCTGATGATCATTAATGAAGTGGCCATCATGCAAACAGATCCTACAGGGCTTCTGTCATCTGTAAGCTGATCTGCACACGTGACGTgatccactcacacacacacacgctgatctGCTGTTCTCTGTGCGCTCCTGCATTAGTGCAGATCTCTCCGTGTGTTCATGTAGAGTCTCCACCCATGGAGAAGAGCGTGATCAAATTCAGCCACTGCCACAGGGACATCTTCTGCTTCTTCGTGCCGGATCAGTGTCCCGAATGTGGGGAGAGTTTGAGCGGGAAGCGGCTGGAGGAGGCGCCCGTCTCCATCCCAAACCCCTTCAGCAACGGACACAAAACCCCATGTGCTTTTCTGGTGGCGTCAGCTGAAGACCGGCTGCTCAGGGACTTTGATGGACAATCTGATCTGCATACAGGAATCACCAACACAAATGGCGTGGTGTATAATTACACATGTGCGGGTGTGCAGAGGGAGACTCAGGGCTGGGAGCGCTGCATCTGTGTGCCGCTGGTGCAGCCGGATATGTTCAGTCTGATCAGCCAATGGGATCAATATCTGGAGAAATTCTCCACCGCTCAGATGTGGGACCCGCTCTGGCAGAGCTTTAATGAAGAGAGCCACAACTGCTTCAGCTTCACACTGATGTTCATCAACTGTGTTCTGGCCACGCAGTCCAAGCGCGCGCTCAGCAAAGATGAGTTCACACACTCGTTCGTGCTCCCTCGCATTAAAAGAGCCTCCAAATACATGATGCTGTGCAGCCAGATAACCCAGAACCACTTCTACATCGTCAACAACCCGAGGAGAAACTCTCAAGACGACCCAATGGAGGAAAACCACAACTGATGGAGCTGCACTGCAAAACAACACTCAGTATATTCATACATCTTGTATCAAGGTGACAGTGAGTCATGATGTGCCTGATAAACACAAGTACACCGCTGGACACGCTTTACTACTGAGATATCTGCATTTATCGCACCCACAGTACGTCAAATGAGCTCAAACATGGGCtatcaattgatttatttatgggGTCAACTGTTCCATGCAACATAGTCtccttctgaaaacgtagccctgtgtATACATCTAGAGACGGTGAATTATGCAGCTAGGGgaacgtacggctgcatttagtCTATAAAACGAACTCTACAGGACGGTATGACGGCGTTCCCTTTTACGCTTACCAGAACTTGCTGACTCAAAAAGCgtgcacagcagcctctggtgcatttgcaaaaactgcaaaaaaacaccccccccccgggatgtatttggcgctctccggaaatgtatacaggggcaCGTAATCTGAATGCGCCTGGGTTGGTTCCGTGTGTAACTTGACCATTTAACTACAagtaacttagtttaataagttgtAATTAATGTAAAAGCACATGCAGCGATCATAATAAAGCAGTTTCTCCCTCACAGCTCTCTCTTCTGCAGTCATATTCTCTCCAGGATGCTGCGCAGAtgcagattagtcagtactgatgaACTAAAAAGATGAAGATCACAGTCTGAAAATGAGTGCGTGTAAATTAAGATGATCAGGGAAAAATAGCACATAAAATTGTaatgaggaaaaatcaagaaaaagaatttaaaaaaatataaagtttaGTGGTAATAGTGTAGTTTTGTCAATCATATTTGCAATAGCTAGCTTTAATATAAGTGCATTATCTTTATATTCCTGAAGATGTTCAGTGaacactcttattttaatggatttaactgtttaataaaacaggtgacgcagtgggtagcacattcgcctcacagca
>TCONS_00006155
ATGGAGAAGAGCGTGATCAAATTCAGCCACTGCCACAGGGACATCTTCTGCTTCTTCGTGCCGGATCAGTGTCCCGAATGTGGGGAGAGTTTGAGCGGGAAGCGGCTGGAGGAGGCGCCCGTCTCCATCCCAAACCCCTTCAGCAACGGACACAAAACCCCATGTGCTTTTCTGGTGGCGTCAGCTGAAGACCGGGACTTTGATGGACAATCTGATCTGCATACAGGAATCACCAACACAAATGGCGTGGTGTATAATTACACATGTGCGGGTGTGCAGAGGGAGACTCAGGGCTGGGAGCGCTGCATCTGTGTGCCGCTGGTGCAGCCGGATATGTTCAGTCTGATCAGCCAATGGGATCAATATCTGGAGAAATTCTCCACCGCTCAGATGTGGGACCCGCTCTGCTTTAATGAAGAGAGCCACAACTGCTTCAGCTTCACACTGATGTTCATCAACTGTGTTCTGGCCACGCAGTCCAAGCGCGCGCTCAGCAAAGATGAGTTCACACACTCGTTCGTGCTCCCTCGCATTAAAAGAGCCTCCAAATACATGATTCCACGTGAACTGAAAGCTGtgacctttttttttgtattgtga

Function

symbol description
mkrn2os.2 Orthologous to human MKRN2OS (MKRN2 opposite strand).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-160114-87 Orthologous to human MKRN2OS (MKRN2 opposite strand).

Ensembl:

ensembl_id ENSDARG00000100728

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006154 False 2202 mRNA 0.45 4 583142 587187
TCONS_00006155 True 600 mRNA 0.52 5 583725 589128

Neighbor

gene id symbol gene type direction distance location
XLOC_003113 mkrn2os.1 coding upstream 2309 575665 ~ 580833 (+)
XLOC_003112 NA coding upstream 38948 543348 ~ 544194 (+)
XLOC_003111 raf1b coding upstream 42890 506465 ~ 540252 (+)
XLOC_003109 NA coding upstream 78313 474380 ~ 504829 (+)
XLOC_003110 NA coding upstream 88609 489935 ~ 494533 (+)
XLOC_003115 timp4.1 coding downstream 102606 691734 ~ 701305 (+)
XLOC_003116 timp4.2 coding downstream 116599 705727 ~ 711032 (+)
XLOC_003117 timp4.3 coding downstream 125258 714386 ~ 718748 (+)
XLOC_003118 FQ311892.1 coding downstream 141679 730807 ~ 730923 (+)
XLOC_003119 vgll4b coding downstream 180495 769623 ~ 772459 (+)
XLOC_003250 BX324177.11 misc downstream 10756675 11345803 ~ 11346099 (+)
XLOC_003255 BX324177.14 misc downstream 10783758 11372886 ~ 11373182 (+)
XLOC_003257 BX324177.13 misc downstream 10797234 11386362 ~ 11386658 (+)
XLOC_003260 BX324177.2 misc downstream 10828905 11418033 ~ 11418323 (+)
XLOC_003262 BX324177.15 misc downstream 10840265 11429393 ~ 11429689 (+)
XLOC_003107 CR855375.1 non-coding upstream 211702 371322 ~ 371440 (+)
XLOC_003104 NA non-coding upstream 284043 298450 ~ 299099 (+)
XLOC_003126 AL935272.1 non-coding downstream 956989 1546117 ~ 1546231 (+)
XLOC_003132 NA non-coding downstream 1346556 1935684 ~ 1997410 (+)
XLOC_003133 NA non-coding downstream 1362503 1951631 ~ 1952594 (+)
XLOC_003138 mir196c non-coding downstream 1601493 2190621 ~ 2190730 (+)

Expression


Co-expression Network