XLOC_031140


Basic Information

Item Value
gene id XLOC_031140
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 30036486 ~ 30051558 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062024
TCTTGATTTAGCCTTACACACATCCACAGCTCACACAAACATGAACGACGAAAATgtagtatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaaaatgatcgAAAGCAGTGGCGAGATGTAAACCAATACACTAACCAGGTGGTGGCCACAACAaagacagctgtgtgtgtgcatgtgtgtgtgtaaatcccACTCAGACACCTGCACTCAAAGCTTCCTGCTGCTGAACCTCGATCACTTCAAACGACTACCGACACATCGAGCGGAAACAAATATCTGTGGAGAGGCGAACAAAAGACGGAGTAAGAAAGTGAAGAAGCGATTCCTGTTAAATTTTCCTAATGCAAATTACTCTGATCAGACAACACTGTTTGGATTTTCAGAGAAAGCTCTTTCTCCCTCCTCATCCTTGCTCCAGAGGAATTCTGCCGCTGGGCTTTTTAATATTCCCTGTGCTTCAGCGCGGTCCGGCCAAAGCGAGCTGACACTACAGATTAACCACAGACAGAAGGAATGCTGCGGCGCTTTTGTGCCACGTGGAGAGCCGCCAACTAAACGCCTTTGGCCAGGTCGGACGGCAGGAGATCGCCGAAAACAAGGAGAAGCGAGCGAAATGGAGAAAAGCAAAAGAGAATGACAGTGGTGAAGTAAAGACAGCCCACAGTGGCCCTGGTTGGGAGGTGTCAGCCTAATTTGTCAGCTGCTTAATGATGACCTCAAGCGAGCCACAGGAAGATGGCATGGGGAATTCACTAATAAGCCACTGCCAAAAGAGGAACCAGCGCCAAAAATTCAATACTGCATGGCCATTCGAAGACATCAACCTTTGACATGTCACATAGCTTCATCAAGCGCATTTTGATGCTCAGAATGATTCTCTTTTGGTGAGCGGGAAAGTTGAGAATGTTTCAAAATTCCCTCAGTGGTCTCCTTATCTGCGCTCTTTGGGACAGGGAGGCATCATGGGAAGGCTGCGAGTGAGACGGGACGTGCAGGGAGGGGCAGGAGACCCAGTGGCGCCAGCAGTGTGTCTTCAGACACCTGGCATTTTGTTGGTGGTCAGGGTTACCATGGCAACCGGCCAAGATTTTGCCAAGGGCCCCAAAGGCACAGGTGCACGCATTGATTCCCTTCGAGTGTTTCTGTTGTGGTTGAAAACTTTCAAGTCGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062024 True 1194 lncRNA 0.48 2 30036486 30051558

Neighbor

gene id symbol gene type direction distance location
XLOC_031139 NA coding downstream 135383 29896636 ~ 29901103 (-)
XLOC_031138 BX276128.1 coding downstream 226541 29789123 ~ 29809945 (-)
XLOC_031137 CFAP77 coding downstream 255725 29752604 ~ 29780761 (-)
XLOC_031136 NA coding downstream 282147 29746319 ~ 29754339 (-)
XLOC_031135 spaca9 coding downstream 364869 29669938 ~ 29671617 (-)
XLOC_031141 bco2a coding upstream 1156 30052714 ~ 30080332 (-)
XLOC_031142 sdhda coding upstream 29683 30081241 ~ 30088077 (-)
XLOC_031143 zbtb44 coding upstream 79717 30131275 ~ 30151815 (-)
XLOC_031144 adamts8a coding upstream 104276 30155834 ~ 30176970 (-)
XLOC_031145 snx19a coding upstream 299675 30351233 ~ 30380593 (-)
XLOC_031133 NA non-coding downstream 442965 29589820 ~ 29593521 (-)
XLOC_031125 BX571772.1 non-coding downstream 743420 29258016 ~ 29293066 (-)
XLOC_031121 NA non-coding downstream 1033813 28999836 ~ 29002673 (-)
XLOC_031147 BX294389.1 non-coding upstream 339335 30390893 ~ 30392592 (-)
XLOC_031158 CR753844.1 non-coding upstream 877489 30929047 ~ 30930288 (-)
XLOC_031161 NA non-coding upstream 1030781 31082339 ~ 31113121 (-)
XLOC_031162 NA non-coding upstream 1214716 31266274 ~ 31274665 (-)
XLOC_031165 NA non-coding upstream 1623095 31674653 ~ 31676807 (-)

Expression


Co-expression Network