G1202728


Basic Information

Item Value
gene id G1202728
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 870677 ~ 870957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1374001
ACCTTATGCACTACTGGAAGGGAATGTGAACAAGATCTTGAACTCATGACATCAAACTTTGCCACTAATTCATATTTAAATGATGCAGTTGTCCCTCCACTTCATCTGTTTGACTCAGTGGTCTTATGGTTGGTGACGTATGTTGGTATTGTGTATGTTGAATGTAATATTACTGGTTGTCTCATGCAACATCCATTTAGGCACTGAACCTGCACCACTGTGTGTGATCTTCTTCAGGCAACAGCTATACCATTATACATTATGCAACATTATACCTGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1374001 True 281 lncRNA 0.39 1 870677 870957

Neighbor

gene id symbol gene type direction distance location
LOC110488511 rnf212 coding upstream 99931 762890 ~ 770746 (+)
si:ch211-255i20.3 LOC106604974 coding upstream 110050 750392 ~ 760694 (+)
LOC110512013 ctbp1 coding upstream 119057 732078 ~ 751620 (+)
LOC118938770 LOC106604976 coding upstream 221535 644145 ~ 649142 (+)
LOC110488532 slbp coding upstream 389391 467839 ~ 481286 (+)
LOC110488542 NA coding downstream 236832 1107789 ~ 1116632 (+)
LOC110488544 LOC106604961 coding downstream 1086359 1957316 ~ 1961986 (+)
LOC110488545 LOC106604959 coding downstream 1440110 2311067 ~ 2321285 (+)
LOC110488546 LOC106604958 coding downstream 1470040 2340997 ~ 2516222 (+)
LOC110488547 LOC100136420 coding downstream 1744400 2615357 ~ 2616987 (+)
G1202718 NA non-coding upstream 6138 864340 ~ 864539 (+)
G1202680 NA non-coding upstream 14012 855172 ~ 856665 (+)
G1202625 NA non-coding upstream 89206 781160 ~ 781471 (+)
G1202616 NA non-coding upstream 93014 777309 ~ 777663 (+)
G1202609 NA non-coding upstream 96677 773727 ~ 774000 (+)
G1202741 NA non-coding downstream 7518 878475 ~ 878742 (+)
G1202751 NA non-coding downstream 24183 895140 ~ 895348 (+)
G1202816 NA non-coding downstream 62991 933948 ~ 934149 (+)
G1202825 NA non-coding downstream 68400 939357 ~ 939783 (+)
G1202829 NA non-coding downstream 70709 941666 ~ 941948 (+)
G1202826 NA other downstream 69545 940502 ~ 941174 (+)
LOC110488551 LOC106604955 other downstream 2280747 2837214 ~ 3160873 (+)
G1205631 LOC106611372 other downstream 2303545 3174502 ~ 3175230 (+)
LOC110488581 LOC106611927 other downstream 3456596 4327546 ~ 4477610 (+)
G1207553 NA other downstream 4051184 4922141 ~ 4922560 (+)

Expression


Co-expression Network