G1202829


Basic Information

Item Value
gene id G1202829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 941666 ~ 941948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1374107
cctcagggagaatcccctcggggtcagtggaggctactgaagaactgaagagacgagataaagcatcaggcttggtgttcttagagcccggacgataagaaatcacgaactcgaaacgagcgaaaaacagcacccagcgcgcctgacgcgcattaagtcgtttggcagaacggatgtactcaaggttcctatggtcagtccaaacgacaaaaggaacggtcgccccctccaaccactgtcgccattcgcctagggctaagcggatggcgagcagttcgcggtt

Function

NR:

description
PREDICTED: uncharacterized protein LOC102210904

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1374107 True 283 lncRNA 0.55 1 941666 941948

Neighbor

gene id symbol gene type direction distance location
LOC110488511 rnf212 coding upstream 170920 762890 ~ 770746 (+)
si:ch211-255i20.3 LOC106604974 coding upstream 181039 750392 ~ 760694 (+)
LOC110512013 ctbp1 coding upstream 190046 732078 ~ 751620 (+)
LOC118938770 LOC106604976 coding upstream 292524 644145 ~ 649142 (+)
LOC110488532 slbp coding upstream 460380 467839 ~ 481286 (+)
LOC110488542 NA coding downstream 165841 1107789 ~ 1116632 (+)
LOC110488544 LOC106604961 coding downstream 1015368 1957316 ~ 1961986 (+)
LOC110488545 LOC106604959 coding downstream 1369119 2311067 ~ 2321285 (+)
LOC110488546 LOC106604958 coding downstream 1399049 2340997 ~ 2516222 (+)
LOC110488547 LOC100136420 coding downstream 1673409 2615357 ~ 2616987 (+)
G1202825 NA non-coding upstream 1883 939357 ~ 939783 (+)
G1202816 NA non-coding upstream 7517 933948 ~ 934149 (+)
G1202751 NA non-coding upstream 46318 895140 ~ 895348 (+)
G1202741 NA non-coding upstream 62924 878475 ~ 878742 (+)
G1202728 NA non-coding upstream 70709 870677 ~ 870957 (+)
G1202833 NA non-coding downstream 7179 949127 ~ 949367 (+)
G1202875 NA non-coding downstream 29154 971102 ~ 971561 (+)
G1202905 NA non-coding downstream 50996 992944 ~ 993166 (+)
G1202909 NA non-coding downstream 56903 998851 ~ 999217 (+)
G1202925 NA non-coding downstream 69873 1011821 ~ 1012035 (+)
G1202826 NA other upstream 492 940502 ~ 941174 (+)
LOC110488551 LOC106604955 other downstream 2209756 2837214 ~ 3160873 (+)
G1205631 LOC106611372 other downstream 2232554 3174502 ~ 3175230 (+)
LOC110488581 LOC106611927 other downstream 3385605 4327546 ~ 4477610 (+)
G1207553 NA other downstream 3980193 4922141 ~ 4922560 (+)
G1208884 NA other downstream 4961973 5903921 ~ 5907769 (+)

Expression


Co-expression Network