Gene
RNA
| Item | Value |
|---|---|
| gene id | G1202833 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 949127 ~ 949367 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1374111 | True | 241 | lncRNA | 0.38 | 1 | 949127 | 949367 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488511 | rnf212 | coding | upstream | 178381 | 762890 ~ 770746 (+) |
| si:ch211-255i20.3 | LOC106604974 | coding | upstream | 188500 | 750392 ~ 760694 (+) |
| LOC110512013 | ctbp1 | coding | upstream | 197507 | 732078 ~ 751620 (+) |
| LOC118938770 | LOC106604976 | coding | upstream | 299985 | 644145 ~ 649142 (+) |
| LOC110488532 | slbp | coding | upstream | 467841 | 467839 ~ 481286 (+) |
| LOC110488542 | NA | coding | downstream | 158422 | 1107789 ~ 1116632 (+) |
| LOC110488544 | LOC106604961 | coding | downstream | 1007949 | 1957316 ~ 1961986 (+) |
| LOC110488545 | LOC106604959 | coding | downstream | 1361700 | 2311067 ~ 2321285 (+) |
| LOC110488546 | LOC106604958 | coding | downstream | 1391630 | 2340997 ~ 2516222 (+) |
| LOC110488547 | LOC100136420 | coding | downstream | 1665990 | 2615357 ~ 2616987 (+) |
| G1202829 | NA | non-coding | upstream | 7179 | 941666 ~ 941948 (+) |
| G1202825 | NA | non-coding | upstream | 9344 | 939357 ~ 939783 (+) |
| G1202816 | NA | non-coding | upstream | 14978 | 933948 ~ 934149 (+) |
| G1202751 | NA | non-coding | upstream | 53779 | 895140 ~ 895348 (+) |
| G1202741 | NA | non-coding | upstream | 70385 | 878475 ~ 878742 (+) |
| G1202875 | NA | non-coding | downstream | 21735 | 971102 ~ 971561 (+) |
| G1202905 | NA | non-coding | downstream | 43577 | 992944 ~ 993166 (+) |
| G1202909 | NA | non-coding | downstream | 49484 | 998851 ~ 999217 (+) |
| G1202925 | NA | non-coding | downstream | 62454 | 1011821 ~ 1012035 (+) |
| G1202940 | NA | non-coding | downstream | 71581 | 1020948 ~ 1021222 (+) |
| G1202826 | NA | other | upstream | 7953 | 940502 ~ 941174 (+) |
| LOC110488551 | LOC106604955 | other | downstream | 2202337 | 2837214 ~ 3160873 (+) |
| G1205631 | LOC106611372 | other | downstream | 2225135 | 3174502 ~ 3175230 (+) |
| LOC110488581 | LOC106611927 | other | downstream | 3378186 | 4327546 ~ 4477610 (+) |
| G1207553 | NA | other | downstream | 3972774 | 4922141 ~ 4922560 (+) |
| G1208884 | NA | other | downstream | 4954554 | 5903921 ~ 5907769 (+) |
