G1202909


Basic Information

Item Value
gene id G1202909
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 998851 ~ 999217 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1374187
acggtcaacccaaaatacagggtgaaataatccaacacaggattaaATGTATCGGAGCAAATAACACAATACGTATTCACGAAAAtacatgaaaccaaaacaatcccgcacgaaacaagggcgggacaacctactacatataaggacgtcaataaactaaaatacacacaggtgaaactaataagacaaaaccaacagacaaacgaaaaagggatcgatggtggctagtaggacggtgacgacgaccgccgagcaccgcccgaacaggcaggagagccaacttcggcggaagtcgtgacacatgcATCCGTTTGTCAAAACAACCTGAAGATGTTCCGCCAAGCGGCCCCACCAATAGACGTCCACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1374187 True 367 lncRNA 0.47 1 998851 999217

Neighbor

gene id symbol gene type direction distance location
LOC110488511 rnf212 coding upstream 228105 762890 ~ 770746 (+)
si:ch211-255i20.3 LOC106604974 coding upstream 238224 750392 ~ 760694 (+)
LOC110512013 ctbp1 coding upstream 247231 732078 ~ 751620 (+)
LOC118938770 LOC106604976 coding upstream 349709 644145 ~ 649142 (+)
LOC110488532 slbp coding upstream 517565 467839 ~ 481286 (+)
LOC110488542 NA coding downstream 108572 1107789 ~ 1116632 (+)
LOC110488544 LOC106604961 coding downstream 958099 1957316 ~ 1961986 (+)
LOC110488545 LOC106604959 coding downstream 1311850 2311067 ~ 2321285 (+)
LOC110488546 LOC106604958 coding downstream 1341780 2340997 ~ 2516222 (+)
LOC110488547 LOC100136420 coding downstream 1616140 2615357 ~ 2616987 (+)
G1202905 NA non-coding upstream 5685 992944 ~ 993166 (+)
G1202875 NA non-coding upstream 27290 971102 ~ 971561 (+)
G1202833 NA non-coding upstream 49484 949127 ~ 949367 (+)
G1202829 NA non-coding upstream 56903 941666 ~ 941948 (+)
G1202825 NA non-coding upstream 59068 939357 ~ 939783 (+)
G1202925 NA non-coding downstream 12604 1011821 ~ 1012035 (+)
G1202940 NA non-coding downstream 21731 1020948 ~ 1021222 (+)
G1202959 NA non-coding downstream 34355 1033572 ~ 1033791 (+)
G1202973 NA non-coding downstream 43138 1042355 ~ 1042642 (+)
G1202982 NA non-coding downstream 50393 1049610 ~ 1049893 (+)
G1202826 NA other upstream 57677 940502 ~ 941174 (+)
LOC110488551 LOC106604955 other downstream 2152487 2837214 ~ 3160873 (+)
G1205631 LOC106611372 other downstream 2175285 3174502 ~ 3175230 (+)
LOC110488581 LOC106611927 other downstream 3328336 4327546 ~ 4477610 (+)
G1207553 NA other downstream 3922924 4922141 ~ 4922560 (+)
G1208884 NA other downstream 4904704 5903921 ~ 5907769 (+)

Expression


Co-expression Network