XLOC_031161



Basic Information


Item Value
gene id XLOC_031161
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 31082339 ~ 31113121 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00062025
AGAAGGGATGCACAGGAAGAAACACTGGTGGTACTATGAGTCCCTCCAACGGATCTGGTCTGTTTGGGTCGGCATCATCAGCACAGCAGCTGGAGTGGTCAGAGTCCTGCTccttctctctctccttctctccatCTGTCTCAGTGTCCGCGTCCTCCGCCATCGAATGAATCTCTCGCTTGGAGGAATACAGCATGATGGAGAGGATCTCTAGGTCTCGCAAAAGCCACATCTTGCTGAAACCGGTACCTTTGCTACATTTTCGAACCAGGAGCTGCATGAGGCCAGAGCCTTGGAGGGCCTCCTGGGCTTGATCCACACCATGCTT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00062025 True 328 lncRNA 0.54 2 31082339 31113121

Neighbor


gene id symbol gene type direction distance location
XLOC_031160 cyb5d2 coding downstream 47141 31032149 ~ 31035198 (-)
XLOC_031159 spns3 coding downstream 98068 30956981 ~ 30984271 (-)
XLOC_031158 CR753844.1 coding downstream 152051 30929047 ~ 30930288 (-)
XLOC_031157 spns2 coding downstream 157886 30802798 ~ 30924453 (-)
XLOC_031156 ftr82 coding downstream 367114 30707133 ~ 30715225 (-)
XLOC_031162 NA coding upstream 153153 31266274 ~ 31274665 (-)
XLOC_031163 p2rx1 coding upstream 326269 31439390 ~ 31470426 (-)
XLOC_031164 sh3glb2b coding upstream 527760 31640881 ~ 31689911 (-)
XLOC_031165 NA coding upstream 561532 31674653 ~ 31676807 (-)
XLOC_031166 NA coding upstream 577969 31691090 ~ 31692364 (-)
XLOC_031147 BX294389.1 non-coding downstream 689747 30390893 ~ 30392592 (-)
XLOC_031140 NA non-coding downstream 1030781 30036486 ~ 30051558 (-)
XLOC_031139 NA non-coding downstream 1181236 29896636 ~ 29901103 (-)
XLOC_031136 NA non-coding downstream 1328000 29746319 ~ 29754339 (-)
XLOC_031177 NA non-coding upstream 988163 32101284 ~ 32103326 (-)
XLOC_031178 BX004981.1 non-coding upstream 1016361 32129482 ~ 32132230 (-)

Expression



Co-expression Network