XLOC_031171 (tmem119b)


Basic Information

Item Value
gene id XLOC_031171
gene name tmem119b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 31872049 ~ 31875645 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060538
AGATGTAATGCTTACACTGGAGGAATTTACATTAAGTTTAGCTTCAAGATACTGGATGAAAAGAAAACCTGCAGGAAAATTCCTCACAGTCTCCCTAGTTTGTTGAAACAAACTATGCTACATCTGGTGGCTTGAAGTTCTCCAGTGCACACAGGCAAGAGGAGGGGGGAAAAACTCGGCTCTCCCCCAAAACAGCCTTAACGAGAACAGTGTGTCTGGAAATGACCCAGTCAGTCTTTCTGGGATAGGGAAGAAGCAGgagaagtagaagaagaagaaaaggggAGGAGGGGAAAGCAGGAGTTTCTTTCCCCCATCAGCAGTCCAGCAGTTCTTCATCTTGCAGTCTGAGAGGAGGAAACAGCAGACGTTTCTTCTCAATGCCAGATCATCTTCAGTCGGCATGTTTTAGAACTCTAAAGTATTGAGTCACAGGATGGATCACTCAGCTCTCCGCTGCCTCATCGGCCTGTCCATTGTTCTGCTAACCAAAAAGTACTCTAATGCCACCCCAGTCATTTTAAATGACTCTTGGGAGGGCAGTGGCCAGTGGTATTCTACGATCATAGATGTGGATTTCACACCCAGCATCCCTTCCTTTCTCAATGACTCTGTGAAGTCCACCTCCATAGATGGAGATAAACAAACCAAACCATTCTGGAATCAAGCAGCAGATTTTTTAAAAGAGAACCACCTCCCCATAATCGTCATTACCACACTAATCCTTCTCATCTTCACCATCCTCTGCTCGGCTGCCATTTTGAGTCGCCGACGTAAAGTCAGCACCTACTACCCCTGTGCTTTTCCCTCAAAGATGTACGTGGATGAGCAAGACAAGGCTGGGGGAGGACGCTTCTTCAGCGAAGTCCCAGAAAAAACCAACACCAGCCCCAGTGAGGAGCCAGTGAATTCAGCCAGGCAGCTCCAGGAGGACATCATGATGGCCACCAAGAACCTCAGAACTCCACTCAAGAGTCCGTGGAAGGAGAAGAGTGAAGAGGCAGAAGCCCAAAAACCTGCAGAGGAGGAGGAAAGTCCTCTATGTGAGCTGAGTCAAGAGGAGAGCTGTGGTTTGCTGGAAGAAAATATCACAAATGAGTCTGTTGTTGATGATCCTGTGGAAAAGATCAGCCCCAGCAGGTCCCAGGACGATGTCCCATCTTGTGACATGGAAAAGACTGACCTCTCGGACTCTGGGCCCCCTGATGAGAGCAAACATCCATCTGGGCTAGAGAATTCTGAGATACAAGAGGACACGAACAAACAGGAAGTCACTACTTCAGGCTCTCCATTCATCAGCAAAGAGAAAACAGCATTTTAATGTGGACATTTTAAAAGCCTTGAAGGAAACACAAGTACAgagcaaactgtgttttttggaCATTGTAAAAGTGAAGAATGTGGTATGAGGTTTCATGATTTTCCCAAAAGTTTGTATGGCTTTATTGTTGTTTCTGACTGTTTACTTTCATGTAACATATGTAATCTGTTTTGAATCGCTATTTTAAATGCTACGAACGGATGCCTGCTGGG

Function

symbol description
tmem119b Predicted to be involved in positive regulation of bone mineralization; positive regulation of osteoblast differentiation; and positive regulation of osteoblast proliferation. Predicted to act upstream of or within ossification. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human TMEM119 (transmembrane protein 119).

GO:

id name namespace
GO:0033690 positive regulation of osteoblast proliferation biological_process
GO:0001503 ossification biological_process
GO:0030501 positive regulation of bone mineralization biological_process
GO:0045669 positive regulation of osteoblast differentiation biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070410-49 Predicted to be involved in positive regulation of bone mineralization; positive regulation of osteoblast differentiation; and positive regulation of osteoblast proliferation. Predicted to act upstream of or within ossification. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human TMEM119 (transmembrane protein 119).

Ensembl:

ensembl_id ENSDARG00000068036

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060538 True 1533 mRNA 0.46 2 31872049 31875645

Neighbor

gene id symbol gene type direction distance location
XLOC_031170 pkn3 coding downstream 14456 31830476 ~ 31857593 (-)
XLOC_031169 fam102ab coding downstream 98840 31723404 ~ 31773209 (-)
XLOC_031168 dpm2 coding downstream 155336 31714358 ~ 31716713 (-)
XLOC_031167 pip5kl1 coding downstream 159650 31693316 ~ 31712399 (-)
XLOC_031166 NA coding downstream 179685 31691090 ~ 31692364 (-)
XLOC_031172 coro1cb coding upstream 4941 31880586 ~ 31904562 (-)
XLOC_031173 ssh1b coding upstream 39261 31914906 ~ 31928913 (-)
XLOC_031174 svopb coding upstream 56189 31931834 ~ 31942621 (-)
XLOC_031175 arpc5lb coding upstream 185236 32060881 ~ 32074637 (-)
XLOC_031176 cabp7b coding upstream 210803 32086448 ~ 32092856 (-)
XLOC_031165 NA non-coding downstream 195242 31674653 ~ 31676807 (-)
XLOC_031162 NA non-coding downstream 597384 31266274 ~ 31274665 (-)
XLOC_031161 NA non-coding downstream 758928 31082339 ~ 31113121 (-)
XLOC_031158 CR753844.1 non-coding downstream 941761 30929047 ~ 30930288 (-)
XLOC_031177 NA non-coding upstream 225639 32101284 ~ 32103326 (-)
XLOC_031178 BX004981.1 non-coding upstream 253837 32129482 ~ 32132230 (-)
XLOC_031179 NA non-coding upstream 259557 32135202 ~ 32136421 (-)
XLOC_031181 BX004981.3 non-coding upstream 294525 32170170 ~ 32170286 (-)
XLOC_031187 NA non-coding upstream 466598 32342243 ~ 32357002 (-)

Expression


Co-expression Network