Gene
RNA
| Item | Value |
|---|---|
| gene id | G1206826 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 4255212 ~ 4255424 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1378349 | True | 213 | lncRNA | 0.67 | 1 | 4255212 | 4255424 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488579 | LOC100136477 | coding | upstream | 20804 | 4167628 ~ 4234408 (+) |
| LOC110488578 | LOC106604931 | coding | upstream | 126069 | 4100421 ~ 4129143 (+) |
| casp | casp | coding | upstream | 428359 | 3811379 ~ 3826853 (+) |
| LOC110488574 | LOC106604937 | coding | upstream | 611794 | 3606916 ~ 3643418 (+) |
| roa0 | roa0 | coding | upstream | 648652 | 3597238 ~ 3606560 (+) |
| LOC110488580 | slc26a2 | coding | downstream | 457 | 4255881 ~ 4270729 (+) |
| LOC110489462 | NA | coding | downstream | 30186 | 4285610 ~ 4288769 (+) |
| LOC110488581 | LOC106611927 | coding | downstream | 72122 | 4327546 ~ 4477610 (+) |
| LOC110488584 | NA | coding | downstream | 114748 | 4370172 ~ 4371370 (+) |
| LOC110488586 | LOC106604927 | coding | downstream | 381170 | 4636594 ~ 4643947 (+) |
| G1206794 | NA | non-coding | upstream | 102460 | 4152539 ~ 4152752 (+) |
| G1206767 | NA | non-coding | upstream | 153725 | 4101285 ~ 4101487 (+) |
| G1206490 | NA | non-coding | upstream | 376230 | 3878656 ~ 3878982 (+) |
| G1206401 | NA | non-coding | upstream | 510605 | 3744373 ~ 3744607 (+) |
| G1206834 | NA | non-coding | downstream | 10721 | 4266145 ~ 4266404 (+) |
| G1206840 | NA | non-coding | downstream | 21399 | 4276823 ~ 4277062 (+) |
| G1206849 | NA | non-coding | downstream | 34388 | 4289812 ~ 4290076 (+) |
| G1207045 | NA | non-coding | downstream | 131349 | 4386773 ~ 4389477 (+) |
| G1207056 | NA | non-coding | downstream | 148557 | 4403981 ~ 4404212 (+) |
| G1205631 | LOC106611372 | other | upstream | 1079982 | 3174502 ~ 3175230 (+) |
| LOC110488551 | LOC106604955 | other | upstream | 1102479 | 2837214 ~ 3160873 (+) |
| G1202826 | NA | other | upstream | 3314038 | 940502 ~ 941174 (+) |
| si:ch211-255i20.3 | LOC106604974 | other | upstream | 3494518 | 750392 ~ 760694 (+) |
| G1207553 | NA | other | downstream | 666717 | 4922141 ~ 4922560 (+) |
| G1208884 | NA | other | downstream | 1648497 | 5903921 ~ 5907769 (+) |
| G1209615 | LOC106604863 | other | downstream | 2488510 | 6743934 ~ 6744790 (+) |
| G1209622 | NA | other | downstream | 2495928 | 6751352 ~ 6751714 (+) |
