G1207493


Basic Information

Item Value
gene id G1207493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 4797568 ~ 4797821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1379055
ccattgaaagcCTTTGTTTTGATTTGAAAAGGGCATTCAATAAGCGCAGACGTAGGATATCAGGGATCTGAAAGAAATGTGTATGGTGGAATGGTCTAAGAACCCTCCCAATGTGTtatccaatctcataaaacattttagaaaaaggctatGTCATTATCCTCGCACGGGAAGGTTGTtggagtattgaaaacatggGACCCAATATTGttcaacaaaatctctttctctgagcaattgtattagtataaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1379055 True 254 lncRNA 0.37 1 4797568 4797821

Neighbor

gene id symbol gene type direction distance location
LOC110488588 NA coding upstream 58323 4730739 ~ 4739245 (+)
LOC110488586 LOC106604927 coding upstream 153621 4636594 ~ 4643947 (+)
LOC110488581 LOC106611927 coding upstream 319958 4327546 ~ 4477610 (+)
LOC110488584 NA coding upstream 426198 4370172 ~ 4371370 (+)
LOC110489462 NA coding upstream 508799 4285610 ~ 4288769 (+)
phykpl LOC100286425 coding downstream 139482 4937303 ~ 4965435 (+)
LOC110488601 NA coding downstream 418550 5216371 ~ 5220040 (+)
LOC110488602 NA coding downstream 430206 5228027 ~ 5232654 (+)
LOC110488605 LOC106604911 coding downstream 600589 5398410 ~ 5402791 (+)
LOC110488611 LOC106604836 coding downstream 1202279 6000100 ~ 6003751 (+)
G1207465 NA non-coding upstream 15788 4759232 ~ 4781780 (+)
G1207445 NA non-coding upstream 56461 4740888 ~ 4741107 (+)
G1207443 NA non-coding upstream 60071 4737228 ~ 4737497 (+)
G1207439 NA non-coding upstream 69219 4728022 ~ 4728349 (+)
G1207395 NA non-coding upstream 104822 4690059 ~ 4692746 (+)
G1207496 NA non-coding downstream 2983 4800804 ~ 4801020 (+)
G1207502 NA non-coding downstream 11802 4809623 ~ 4850656 (+)
G1207453 NA non-coding downstream 29736 4827557 ~ 4831986 (+)
G1207527 NA non-coding downstream 53080 4850901 ~ 4851460 (+)
G1207529 NA non-coding downstream 58587 4856408 ~ 4856614 (+)
G1205631 LOC106611372 other upstream 1622338 3174502 ~ 3175230 (+)
LOC110488551 LOC106604955 other upstream 1644835 2837214 ~ 3160873 (+)
G1202826 NA other upstream 3856394 940502 ~ 941174 (+)
si:ch211-255i20.3 LOC106604974 other upstream 4036874 750392 ~ 760694 (+)
G1207553 NA other downstream 124320 4922141 ~ 4922560 (+)
G1208884 NA other downstream 1106100 5903921 ~ 5907769 (+)
G1209615 LOC106604863 other downstream 1946113 6743934 ~ 6744790 (+)
G1209622 NA other downstream 1953531 6751352 ~ 6751714 (+)
G1209572 NA other downstream 1955136 6752864 ~ 6756811 (+)

Expression


Co-expression Network