Gene
RNA
| Item | Value |
|---|---|
| gene id | G1208321 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 4916934 ~ 4917174 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1379943 | True | 241 | lncRNA | 0.46 | 1 | 4916934 | 4917174 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488591 | LOC106604923 | coding | downstream | 24162 | 4881820 ~ 4892772 (-) |
| LOC110488590 | LOC106604924 | coding | downstream | 36419 | 4861154 ~ 4880515 (-) |
| reep2 | LOC106604925 | coding | downstream | 56500 | 4827541 ~ 4860434 (-) |
| egr1 | LOC106604926 | coding | downstream | 222508 | 4690035 ~ 4694426 (-) |
| LOC100136712 | LOC106604929 | coding | downstream | 349067 | 4531744 ~ 4567867 (-) |
| LOC110488595 | LOC106604921 | coding | upstream | 13306 | 4930480 ~ 4937028 (-) |
| LOC110488598 | LOC100194681 | coding | upstream | 46193 | 4963367 ~ 4969132 (-) |
| LOC100136700 | LOC106604916 | coding | upstream | 60716 | 4977890 ~ 4981528 (-) |
| LOC110488599 | LOC106604914 | coding | upstream | 65014 | 4982188 ~ 5198387 (-) |
| LOC118938691 | NA | coding | upstream | 130969 | 5048143 ~ 5048790 (-) |
| G1208314 | NA | non-coding | downstream | 21210 | 4895499 ~ 4895724 (-) |
| G1208273 | NA | non-coding | downstream | 124125 | 4792571 ~ 4792809 (-) |
| G1208247 | NA | non-coding | downstream | 159544 | 4757174 ~ 4757390 (-) |
| G1208241 | NA | non-coding | downstream | 170558 | 4746170 ~ 4746376 (-) |
| G1208229 | NA | non-coding | downstream | 179075 | 4737637 ~ 4737859 (-) |
| G1208324 | NA | non-coding | upstream | 3316 | 4920490 ~ 4920693 (-) |
| G1208516 | NA | non-coding | upstream | 399760 | 5316934 ~ 5317603 (-) |
| G1208595 | NA | non-coding | upstream | 531198 | 5448372 ~ 5509385 (-) |
| G1208584 | NA | non-coding | upstream | 571456 | 5488630 ~ 5496282 (-) |
| G1206939 | LOC100136477 | other | downstream | 690965 | 4225039 ~ 4225969 (-) |
| LOC110488575 | LOC106604935 | other | downstream | 1182988 | 3728495 ~ 3733973 (-) |
| G1206357 | LOC106604937 | other | downstream | 1304641 | 3610803 ~ 3612293 (-) |
| G1206291 | fbxo38 | other | downstream | 1449265 | 3467063 ~ 3467669 (-) |
| G1206283 | LOC106604946 | other | downstream | 1465805 | 3449081 ~ 3451129 (-) |
| LOC110489463 | LOC106601388 | other | upstream | 624005 | 5541035 ~ 5542569 (-) |
| G1208831 | NA | other | upstream | 949148 | 5866322 ~ 5866950 (-) |
| G1209268 | NA | other | upstream | 1222186 | 6139360 ~ 6140037 (-) |
| G1209275 | LOC106604892 | other | upstream | 1228772 | 6145946 ~ 6150661 (-) |
