G1207727


Basic Information

Item Value
gene id G1207727
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 5276512 ~ 5281983 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1379310
CAAGCAACAAAGAGATGTTGTCTCTGCCCTGTTCATCCACTCAACCTGCTGCCAGTCAAGTAAATGGCAATGCAGACATAAAGATAAAGACTAGATTTAGCAGTCTTAACTTCATAATCATAAGCTAGAAAGATGTGAATGGTATTAAGCTAGTGTAACAGTTGTTAAAGTACTctgtgaatttcaccaggttcatatattaatatgtcgtgttgatttgttattatgcatgcctgcatcctgggagaaggggagtgtgtACTTAGGTTTTGCCCTGCGTGCTCGTGttcaaatcattttgatgcactatgagaggtaggcacgctttttctgttttcttcagaaaagtttgattcttttaagtacaaagtcatacacacagtgttttgttcatgaataatgttgtatatttagaggttactcataagt

Function

NR:

description
zonadhesin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1379310 True 429 lncRNA 0.37 2 5276512 5281983

Neighbor

gene id symbol gene type direction distance location
LOC110488602 NA coding upstream 43858 5228027 ~ 5232654 (+)
LOC110488601 NA coding upstream 56472 5216371 ~ 5220040 (+)
phykpl LOC100286425 coding upstream 325161 4937303 ~ 4965435 (+)
LOC110488588 NA coding upstream 537267 4730739 ~ 4739245 (+)
LOC110488586 LOC106604927 coding upstream 632565 4636594 ~ 4643947 (+)
LOC110488605 LOC106604911 coding downstream 116427 5398410 ~ 5402791 (+)
LOC110488611 LOC106604836 coding downstream 718117 6000100 ~ 6003751 (+)
LOC110488614 LOC106604892 coding downstream 863826 6145809 ~ 6150743 (+)
LOC110488618 LOC106604841 coding downstream 885248 6167231 ~ 6175289 (+)
LOC110488619 LOC106604842 coding downstream 916041 6198024 ~ 6291026 (+)
G1207719 NA non-coding upstream 5290 5268688 ~ 5271222 (+)
G1207697 LOC106604913 non-coding upstream 68704 5206427 ~ 5207808 (+)
G1207693 NA non-coding upstream 74599 5201610 ~ 5201913 (+)
G1207564 NA non-coding upstream 339485 4936793 ~ 4937027 (+)
G1207739 NA non-coding downstream 12690 5294673 ~ 5296176 (+)
G1207787 NA non-coding downstream 80138 5362121 ~ 5451995 (+)
G1207774 NA non-coding downstream 99335 5381318 ~ 5388044 (+)
G1207843 NA non-coding downstream 162046 5444029 ~ 5447797 (+)
G1207553 NA other upstream 353952 4922141 ~ 4922560 (+)
LOC110488581 LOC106611927 other upstream 882472 4327546 ~ 4477610 (+)
G1205631 LOC106611372 other upstream 2101282 3174502 ~ 3175230 (+)
LOC110488551 LOC106604955 other upstream 2123779 2837214 ~ 3160873 (+)
G1202826 NA other upstream 4335338 940502 ~ 941174 (+)
G1208884 NA other downstream 621938 5903921 ~ 5907769 (+)
G1209615 LOC106604863 other downstream 1461951 6743934 ~ 6744790 (+)
G1209622 NA other downstream 1469369 6751352 ~ 6751714 (+)
G1209572 NA other downstream 1470974 6752864 ~ 6756811 (+)
LOC110488661 diaph1 other downstream 2037037 7251365 ~ 7385487 (+)

Expression


Co-expression Network