G1207787


Basic Information

Item Value
gene id G1207787
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 5362121 ~ 5451995 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1379377
ccccgagctgacaagggtaaaaatctgttgttctgcccctgaacaaggcagttaacccactgttcctagccgtcattgaaaataagaatttgttcttaactgacttgcctagttaaataaaggttccatttaaaaaaaaatcaggaaTTAAAAAAAATAGATGCTTAAATTTGACACCAAATGTGATGTGCTCCTATGAACTTTACATGTTAGTACTCATGGGACATTTTACATCAAAATGTCCCTACTGAGCAAGTTTtagttgtgggtgtgtgtatctGAATAAGGTTGCATTGATAGACAGGCAGCCAAATTCGGATAATTGGTCTCCAGCGCTGAAAAAAATCTGATgtaaaaagatctgatgtgattggtcaaaagatcaattAATTTGGCTGTCTTTCTAAATGCAGCCTGTGTGAGTGAGTAATGTAACGTACCGATCTGGCTGTGACTTGCTGCAGTGCGTTCTGACACTTGGTGTAGCAGGCGTCTCTCATGATGATCATGATGACCGGCATGTGCTTGTCAATCAGAGCCAGAGGACCGTGCTTCAGCTCCCCAGCCAAGATGCCCTCTGAATGCATGTAGGGGATTTCCTTGATTTTCTGTATGGGAGGAATCAATCAGTTAAATGACATAATAATCAGTATTATCATGTCAGAGTGTGCATATATATAGAGGTTTAATGGTATATAAAGAAGCGGAAAAGAGGAGAAAATGCCAAACATTGCCCCTAGATGGACGCTGACCTCAGGTCAGTTTTTCATGGTTCCTATAACGGTTGAGGGTTAGTATTTAGGGTGGGTGAGCTAATGCTAGATCTGTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1379377 True 830 lncRNA 0.41 2 5362121 5451995

Neighbor

gene id symbol gene type direction distance location
LOC110488602 NA coding upstream 129467 5228027 ~ 5232654 (+)
LOC110488601 NA coding upstream 142081 5216371 ~ 5220040 (+)
phykpl LOC100286425 coding upstream 410770 4937303 ~ 4965435 (+)
LOC110488588 NA coding upstream 622876 4730739 ~ 4739245 (+)
LOC110488586 LOC106604927 coding upstream 718174 4636594 ~ 4643947 (+)
LOC110488611 LOC106604836 coding downstream 548105 6000100 ~ 6003751 (+)
LOC110488614 LOC106604892 coding downstream 693814 6145809 ~ 6150743 (+)
LOC110488618 LOC106604841 coding downstream 715236 6167231 ~ 6175289 (+)
LOC110488619 LOC106604842 coding downstream 746029 6198024 ~ 6291026 (+)
LOC100136156 LOC100136156 coding downstream 842206 6294201 ~ 6298860 (+)
G1207739 NA non-coding upstream 65945 5294673 ~ 5296176 (+)
G1207727 NA non-coding upstream 80138 5276512 ~ 5281983 (+)
G1207719 NA non-coding upstream 90899 5268688 ~ 5271222 (+)
G1207697 LOC106604913 non-coding upstream 154313 5206427 ~ 5207808 (+)
G1207693 NA non-coding upstream 160208 5201610 ~ 5201913 (+)
G1207876 NA non-coding downstream 36754 5488749 ~ 5496292 (+)
G1207904 NA non-coding downstream 72697 5524692 ~ 5526754 (+)
G1207918 LOC106601388 non-coding downstream 89081 5541076 ~ 5542543 (+)
G1207957 NA non-coding downstream 149504 5601499 ~ 5603511 (+)
G1207986 NA non-coding downstream 198195 5650190 ~ 5650686 (+)
G1207553 NA other upstream 439561 4922141 ~ 4922560 (+)
LOC110488581 LOC106611927 other upstream 968081 4327546 ~ 4477610 (+)
G1205631 LOC106611372 other upstream 2186891 3174502 ~ 3175230 (+)
LOC110488551 LOC106604955 other upstream 2209388 2837214 ~ 3160873 (+)
G1202826 NA other upstream 4420947 940502 ~ 941174 (+)
G1208884 NA other downstream 451926 5903921 ~ 5907769 (+)
G1209615 LOC106604863 other downstream 1291939 6743934 ~ 6744790 (+)
G1209622 NA other downstream 1299357 6751352 ~ 6751714 (+)
G1209572 NA other downstream 1300962 6752864 ~ 6756811 (+)
LOC110488661 diaph1 other downstream 1867025 7251365 ~ 7385487 (+)

Expression


Co-expression Network