Gene
RNA
| Item | Value |
|---|---|
| gene id | G1208679 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 5568298 ~ 5568538 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1380327 | True | 241 | lncRNA | 0.39 | 1 | 5568298 | 5568538 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489463 | LOC106601388 | coding | downstream | 25729 | 5541035 ~ 5542569 (-) |
| LOC110488608 | kiaa1191 | coding | downstream | 37481 | 5524683 ~ 5530817 (-) |
| LOC110488607 | LOC106604909 | coding | downstream | 79758 | 5446073 ~ 5488540 (-) |
| LOC110488604 | LOC106604910 | coding | downstream | 128711 | 5401567 ~ 5439587 (-) |
| LOC110488603 | LOC106604912 | coding | downstream | 241833 | 5268631 ~ 5326465 (-) |
| LOC110488609 | LOC106604833 | coding | upstream | 28801 | 5597339 ~ 5787915 (-) |
| LOC110488610 | LOC106604834 | coding | upstream | 333161 | 5901696 ~ 5924346 (-) |
| LOC110488612 | rgs14 | coding | upstream | 523425 | 6091963 ~ 6125852 (-) |
| LOC110488615 | pfn3 | coding | upstream | 584544 | 6153082 ~ 6153969 (-) |
| LOC110488616 | LOC106604839 | coding | upstream | 587716 | 6156254 ~ 6164408 (-) |
| G1208676 | NA | non-coding | downstream | 2282 | 5565799 ~ 5566016 (-) |
| G1208595 | NA | non-coding | downstream | 58913 | 5448372 ~ 5509385 (-) |
| G1208584 | NA | non-coding | downstream | 72016 | 5488630 ~ 5496282 (-) |
| G1208516 | NA | non-coding | downstream | 250695 | 5316934 ~ 5317603 (-) |
| LOC110488599 | LOC106604914 | non-coding | downstream | 527306 | 4982188 ~ 5198387 (-) |
| G1208765 | NA | non-coding | upstream | 224003 | 5792541 ~ 5795457 (-) |
| G1208800 | NA | non-coding | upstream | 275541 | 5844079 ~ 5844301 (-) |
| G1208836 | NA | non-coding | upstream | 303085 | 5871623 ~ 5871933 (-) |
| G1208842 | NA | non-coding | upstream | 306159 | 5874697 ~ 5874967 (-) |
| G1208869 | NA | non-coding | upstream | 323855 | 5892393 ~ 5892599 (-) |
| G1206939 | LOC100136477 | other | downstream | 1342329 | 4225039 ~ 4225969 (-) |
| LOC110488575 | LOC106604935 | other | downstream | 1834352 | 3728495 ~ 3733973 (-) |
| G1206357 | LOC106604937 | other | downstream | 1956005 | 3610803 ~ 3612293 (-) |
| G1208831 | NA | other | upstream | 297784 | 5866322 ~ 5866950 (-) |
| G1209268 | NA | other | upstream | 570822 | 6139360 ~ 6140037 (-) |
| G1209275 | LOC106604892 | other | upstream | 577408 | 6145946 ~ 6150661 (-) |
| G1209763 | NA | other | upstream | 945673 | 6514211 ~ 6515936 (-) |
| G1211559 | LOC106611856 | other | upstream | 1795759 | 7364297 ~ 7365733 (-) |
