G1209025


Basic Information

Item Value
gene id G1209025
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 6027609 ~ 6027919 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1380690
ggcaagcaaaacctcgagacttccttagatatcgtcgaccagctgttgtttacaaaatatACATAgactgccaccccttgtcttaccagaggccacTGTTCTAACCTGCAGAAAAAGCTTcaaacccaccagctgtatgttattcatgtcgtcgttcagccaagactctgtgaaacataagatattacaatttttaatgtcccgttggtaggatatgcGTGCTTGTCTATTTTATTATCGGATGGTTGtatgttggctaataggactgatggtaaaggcagattacccactcatcgatccttacaaggcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1380690 True 311 lncRNA 0.42 1 6027609 6027919

Neighbor

gene id symbol gene type direction distance location
LOC110488611 LOC106604836 coding upstream 23858 6000100 ~ 6003751 (+)
LOC110488605 LOC106604911 coding upstream 624818 5398410 ~ 5402791 (+)
LOC110488602 NA coding upstream 794955 5228027 ~ 5232654 (+)
LOC110488601 NA coding upstream 807569 5216371 ~ 5220040 (+)
phykpl LOC100286425 coding upstream 1076258 4937303 ~ 4965435 (+)
LOC110488614 LOC106604892 coding downstream 117890 6145809 ~ 6150743 (+)
LOC110488618 LOC106604841 coding downstream 139312 6167231 ~ 6175289 (+)
LOC110488619 LOC106604842 coding downstream 170105 6198024 ~ 6291026 (+)
LOC100136156 LOC100136156 coding downstream 266282 6294201 ~ 6298860 (+)
LOC110488624 LOC106604895 coding downstream 386212 6414131 ~ 6419690 (+)
G1208895 NA non-coding upstream 21889 6004912 ~ 6005720 (+)
G1208938 NA non-coding upstream 32464 5994860 ~ 5995145 (+)
G1208928 NA non-coding upstream 49581 5977802 ~ 5978028 (+)
G1208925 NA non-coding upstream 54481 5972919 ~ 5973128 (+)
G1208907 NA non-coding upstream 83661 5943640 ~ 5943948 (+)
G1209085 NA non-coding downstream 47629 6075548 ~ 6075784 (+)
G1209089 NA non-coding downstream 52638 6080557 ~ 6080858 (+)
G1209125 NA non-coding downstream 112772 6140691 ~ 6141479 (+)
G1209127 NA non-coding downstream 116155 6144074 ~ 6144307 (+)
G1209130 NA non-coding downstream 118455 6146374 ~ 6146767 (+)
G1208884 NA other upstream 119840 5903921 ~ 5907769 (+)
G1207553 NA other upstream 1105049 4922141 ~ 4922560 (+)
LOC110488581 LOC106611927 other upstream 1633569 4327546 ~ 4477610 (+)
G1205631 LOC106611372 other upstream 2852379 3174502 ~ 3175230 (+)
LOC110488551 LOC106604955 other upstream 2874876 2837214 ~ 3160873 (+)
G1209615 LOC106604863 other downstream 716015 6743934 ~ 6744790 (+)
G1209622 NA other downstream 723433 6751352 ~ 6751714 (+)
G1209572 NA other downstream 725038 6752864 ~ 6756811 (+)
LOC110488661 diaph1 other downstream 1291101 7251365 ~ 7385487 (+)
G1210502 NA other downstream 1404458 7432377 ~ 7435168 (+)

Expression


Co-expression Network