Gene
RNA
| Item | Value |
|---|---|
| gene id | G1209085 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 6075548 ~ 6075784 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1380751 | True | 237 | lncRNA | 0.46 | 1 | 6075548 | 6075784 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488611 | LOC106604836 | coding | upstream | 71797 | 6000100 ~ 6003751 (+) |
| LOC110488605 | LOC106604911 | coding | upstream | 672757 | 5398410 ~ 5402791 (+) |
| LOC110488602 | NA | coding | upstream | 842894 | 5228027 ~ 5232654 (+) |
| LOC110488601 | NA | coding | upstream | 855508 | 5216371 ~ 5220040 (+) |
| phykpl | LOC100286425 | coding | upstream | 1124197 | 4937303 ~ 4965435 (+) |
| LOC110488614 | LOC106604892 | coding | downstream | 70025 | 6145809 ~ 6150743 (+) |
| LOC110488618 | LOC106604841 | coding | downstream | 91447 | 6167231 ~ 6175289 (+) |
| LOC110488619 | LOC106604842 | coding | downstream | 122240 | 6198024 ~ 6291026 (+) |
| LOC100136156 | LOC100136156 | coding | downstream | 218417 | 6294201 ~ 6298860 (+) |
| LOC110488624 | LOC106604895 | coding | downstream | 338347 | 6414131 ~ 6419690 (+) |
| G1209025 | NA | non-coding | upstream | 47629 | 6027609 ~ 6027919 (+) |
| G1208895 | NA | non-coding | upstream | 69828 | 6004912 ~ 6005720 (+) |
| G1208938 | NA | non-coding | upstream | 80403 | 5994860 ~ 5995145 (+) |
| G1208928 | NA | non-coding | upstream | 97520 | 5977802 ~ 5978028 (+) |
| G1208925 | NA | non-coding | upstream | 102420 | 5972919 ~ 5973128 (+) |
| G1209089 | NA | non-coding | downstream | 4773 | 6080557 ~ 6080858 (+) |
| G1209125 | NA | non-coding | downstream | 64907 | 6140691 ~ 6141479 (+) |
| G1209127 | NA | non-coding | downstream | 68290 | 6144074 ~ 6144307 (+) |
| G1209130 | NA | non-coding | downstream | 70590 | 6146374 ~ 6146767 (+) |
| G1209133 | NA | non-coding | downstream | 76471 | 6152255 ~ 6152959 (+) |
| G1208884 | NA | other | upstream | 167779 | 5903921 ~ 5907769 (+) |
| G1207553 | NA | other | upstream | 1152988 | 4922141 ~ 4922560 (+) |
| LOC110488581 | LOC106611927 | other | upstream | 1681508 | 4327546 ~ 4477610 (+) |
| G1205631 | LOC106611372 | other | upstream | 2900318 | 3174502 ~ 3175230 (+) |
| LOC110488551 | LOC106604955 | other | upstream | 2922815 | 2837214 ~ 3160873 (+) |
| G1209615 | LOC106604863 | other | downstream | 668150 | 6743934 ~ 6744790 (+) |
| G1209622 | NA | other | downstream | 675568 | 6751352 ~ 6751714 (+) |
| G1209572 | NA | other | downstream | 677173 | 6752864 ~ 6756811 (+) |
| LOC110488661 | diaph1 | other | downstream | 1243236 | 7251365 ~ 7385487 (+) |
| G1210502 | NA | other | downstream | 1356593 | 7432377 ~ 7435168 (+) |
