G1209089


Basic Information

Item Value
gene id G1209089
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 6080557 ~ 6080858 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1380755
gacactaacagtttacagatggtaggcaattaaggtcacagttatgaaaacttaggacactaaagaggcctttctaatgactctgaaaaacaccaaaataaagatgcccagggtccctgctcatctgcgtgaatgtgccttaggcatgctgcaaggaggcatgaggactgcagattaattgcaatgtccatactgtgagacacctaagacagtgctacctggagacaggacggacagctgatcgtcctagcagtggcagaccacatgtaacaacacctgcaaaggatcggtacatctgaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1380755 True 302 lncRNA 0.46 1 6080557 6080858

Neighbor

gene id symbol gene type direction distance location
LOC110488611 LOC106604836 coding upstream 76806 6000100 ~ 6003751 (+)
LOC110488605 LOC106604911 coding upstream 677766 5398410 ~ 5402791 (+)
LOC110488602 NA coding upstream 847903 5228027 ~ 5232654 (+)
LOC110488601 NA coding upstream 860517 5216371 ~ 5220040 (+)
phykpl LOC100286425 coding upstream 1129206 4937303 ~ 4965435 (+)
LOC110488614 LOC106604892 coding downstream 64951 6145809 ~ 6150743 (+)
LOC110488618 LOC106604841 coding downstream 86373 6167231 ~ 6175289 (+)
LOC110488619 LOC106604842 coding downstream 117166 6198024 ~ 6291026 (+)
LOC100136156 LOC100136156 coding downstream 213343 6294201 ~ 6298860 (+)
LOC110488624 LOC106604895 coding downstream 333273 6414131 ~ 6419690 (+)
G1209085 NA non-coding upstream 4773 6075548 ~ 6075784 (+)
G1209025 NA non-coding upstream 52638 6027609 ~ 6027919 (+)
G1208895 NA non-coding upstream 74837 6004912 ~ 6005720 (+)
G1208938 NA non-coding upstream 85412 5994860 ~ 5995145 (+)
G1208928 NA non-coding upstream 102529 5977802 ~ 5978028 (+)
G1209125 NA non-coding downstream 59833 6140691 ~ 6141479 (+)
G1209127 NA non-coding downstream 63216 6144074 ~ 6144307 (+)
G1209130 NA non-coding downstream 65516 6146374 ~ 6146767 (+)
G1209133 NA non-coding downstream 71397 6152255 ~ 6152959 (+)
G1209137 NA non-coding downstream 82465 6163323 ~ 6164399 (+)
G1208884 NA other upstream 172788 5903921 ~ 5907769 (+)
G1207553 NA other upstream 1157997 4922141 ~ 4922560 (+)
LOC110488581 LOC106611927 other upstream 1686517 4327546 ~ 4477610 (+)
G1205631 LOC106611372 other upstream 2905327 3174502 ~ 3175230 (+)
LOC110488551 LOC106604955 other upstream 2927824 2837214 ~ 3160873 (+)
G1209615 LOC106604863 other downstream 663076 6743934 ~ 6744790 (+)
G1209622 NA other downstream 670494 6751352 ~ 6751714 (+)
G1209572 NA other downstream 672099 6752864 ~ 6756811 (+)
LOC110488661 diaph1 other downstream 1238162 7251365 ~ 7385487 (+)
G1210502 NA other downstream 1351519 7432377 ~ 7435168 (+)

Expression


Co-expression Network