G1209367


Basic Information

Item Value
gene id G1209367
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 6315017 ~ 6315255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1381070
gttgtgccattcatctgcctccaacacctcatgtttcagcatgataatgcacagccccatgtcgcaaggatctgtacacatttcctggaagctgaaaatgtcccagtccatatctgtattcacagtcatttgaaatccatagattagggcataattcatttatttcatttgactgatttccttatatgaactgtaactcagtcaaattttgttgcatgttgtgttttatatttttgttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1381070 True 239 lncRNA 0.37 1 6315017 6315255

Neighbor

gene id symbol gene type direction distance location
LOC100136156 LOC100136156 coding upstream 16157 6294201 ~ 6298860 (+)
LOC110488619 LOC106604842 coding upstream 23991 6198024 ~ 6291026 (+)
LOC110488618 LOC106604841 coding upstream 139728 6167231 ~ 6175289 (+)
LOC110488614 LOC106604892 coding upstream 164274 6145809 ~ 6150743 (+)
LOC110488611 LOC106604836 coding upstream 311266 6000100 ~ 6003751 (+)
LOC110488624 LOC106604895 coding downstream 98876 6414131 ~ 6419690 (+)
LOC110488626 LOC106604896 coding downstream 116766 6432021 ~ 6440952 (+)
LOC110488627 LOC106604897 coding downstream 148556 6463811 ~ 6468368 (+)
LOC110488631 LOC106604850 coding downstream 235150 6550405 ~ 6557892 (+)
tmco6 tmco6 coding downstream 259800 6575055 ~ 6584480 (+)
G1209219 LOC106604845 non-coding upstream 7193 6307489 ~ 6307824 (+)
G1209137 NA non-coding upstream 150618 6163323 ~ 6164399 (+)
G1209133 NA non-coding upstream 162058 6152255 ~ 6152959 (+)
G1209130 NA non-coding upstream 168250 6146374 ~ 6146767 (+)
G1209127 NA non-coding upstream 170710 6144074 ~ 6144307 (+)
G1209373 NA non-coding downstream 7323 6322578 ~ 6324818 (+)
G1209375 LOC106604846 non-coding downstream 21558 6336813 ~ 6337467 (+)
G1209475 NA non-coding downstream 167836 6483091 ~ 6486616 (+)
G1209491 NA non-coding downstream 188621 6503876 ~ 6510769 (+)
G1209492 NA non-coding downstream 190790 6506045 ~ 6512141 (+)
G1208884 NA other upstream 407248 5903921 ~ 5907769 (+)
G1207553 NA other upstream 1392457 4922141 ~ 4922560 (+)
LOC110488581 LOC106611927 other upstream 1920977 4327546 ~ 4477610 (+)
G1205631 LOC106611372 other upstream 3139787 3174502 ~ 3175230 (+)
LOC110488551 LOC106604955 other upstream 3162284 2837214 ~ 3160873 (+)
G1209615 LOC106604863 other downstream 428679 6743934 ~ 6744790 (+)
G1209622 NA other downstream 436097 6751352 ~ 6751714 (+)
G1209572 NA other downstream 437702 6752864 ~ 6756811 (+)
LOC110488661 diaph1 other downstream 1003765 7251365 ~ 7385487 (+)
G1210502 NA other downstream 1117122 7432377 ~ 7435168 (+)

Expression


Co-expression Network