Gene
RNA
| Item | Value |
|---|---|
| gene id | G1209375 |
| gene name | LOC106604846 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 6336813 ~ 6337467 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| macrophage colony-stimulating factor receptor isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1381085 | True | 461 | lncRNA | 0.57 | 2 | 6336813 | 6337467 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136156 | LOC100136156 | coding | upstream | 37953 | 6294201 ~ 6298860 (+) |
| LOC110488619 | LOC106604842 | coding | upstream | 45787 | 6198024 ~ 6291026 (+) |
| LOC110488618 | LOC106604841 | coding | upstream | 161524 | 6167231 ~ 6175289 (+) |
| LOC110488614 | LOC106604892 | coding | upstream | 186070 | 6145809 ~ 6150743 (+) |
| LOC110488611 | LOC106604836 | coding | upstream | 333062 | 6000100 ~ 6003751 (+) |
| LOC110488624 | LOC106604895 | coding | downstream | 76664 | 6414131 ~ 6419690 (+) |
| LOC110488626 | LOC106604896 | coding | downstream | 94554 | 6432021 ~ 6440952 (+) |
| LOC110488627 | LOC106604897 | coding | downstream | 126344 | 6463811 ~ 6468368 (+) |
| LOC110488631 | LOC106604850 | coding | downstream | 212938 | 6550405 ~ 6557892 (+) |
| tmco6 | tmco6 | coding | downstream | 237588 | 6575055 ~ 6584480 (+) |
| G1209373 | NA | non-coding | upstream | 11995 | 6322578 ~ 6324818 (+) |
| G1209367 | NA | non-coding | upstream | 21558 | 6315017 ~ 6315255 (+) |
| G1209219 | LOC106604845 | non-coding | upstream | 28989 | 6307489 ~ 6307824 (+) |
| G1209137 | NA | non-coding | upstream | 172414 | 6163323 ~ 6164399 (+) |
| G1209133 | NA | non-coding | upstream | 183854 | 6152255 ~ 6152959 (+) |
| G1209475 | NA | non-coding | downstream | 145624 | 6483091 ~ 6486616 (+) |
| G1209491 | NA | non-coding | downstream | 166409 | 6503876 ~ 6510769 (+) |
| G1209492 | NA | non-coding | downstream | 168578 | 6506045 ~ 6512141 (+) |
| G1209544 | NA | non-coding | downstream | 279079 | 6616546 ~ 6616789 (+) |
| G1209548 | NA | non-coding | downstream | 282818 | 6620285 ~ 6620498 (+) |
| G1208884 | NA | other | upstream | 429044 | 5903921 ~ 5907769 (+) |
| G1207553 | NA | other | upstream | 1414253 | 4922141 ~ 4922560 (+) |
| LOC110488581 | LOC106611927 | other | upstream | 1942773 | 4327546 ~ 4477610 (+) |
| G1205631 | LOC106611372 | other | upstream | 3161583 | 3174502 ~ 3175230 (+) |
| LOC110488551 | LOC106604955 | other | upstream | 3184080 | 2837214 ~ 3160873 (+) |
| G1209615 | LOC106604863 | other | downstream | 406467 | 6743934 ~ 6744790 (+) |
| G1209622 | NA | other | downstream | 413885 | 6751352 ~ 6751714 (+) |
| G1209572 | NA | other | downstream | 415490 | 6752864 ~ 6756811 (+) |
| LOC110488661 | diaph1 | other | downstream | 981553 | 7251365 ~ 7385487 (+) |
| G1210502 | NA | other | downstream | 1094910 | 7432377 ~ 7435168 (+) |
