G1209555


Basic Information

Item Value
gene id G1209555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 6629597 ~ 6630138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1381280
tggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggacgtttaaagcttgggaaatctttttgtatccaaatccggctttaagtatcagtatctcggacctgcctggtgtgttccttgttcttcatggtgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgtaaaaaaagttagaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagtctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1381280 True 542 lncRNA 0.39 1 6629597 6630138

Neighbor

gene id symbol gene type direction distance location
LOC110488634 LOC106604853 coding upstream 21190 6594907 ~ 6608407 (+)
tmco6 tmco6 coding upstream 45117 6575055 ~ 6584480 (+)
LOC110488631 LOC106604850 coding upstream 71705 6550405 ~ 6557892 (+)
LOC110488627 LOC106604897 coding upstream 161229 6463811 ~ 6468368 (+)
LOC110488626 LOC106604896 coding upstream 188645 6432021 ~ 6440952 (+)
rnf20 LOC106604856 coding downstream 14668 6644806 ~ 6660926 (+)
LOC110488637 LOC106604857 coding downstream 32414 6662552 ~ 6666405 (+)
LOC110488642 LOC100136498 coding downstream 50905 6681043 ~ 6683423 (+)
LOC110488641 LOC106604858 coding downstream 54991 6685129 ~ 6688042 (+)
LOC110488640 LOC106604860 coding downstream 58036 6688174 ~ 6698972 (+)
G1209554 NA non-coding upstream 109 6629094 ~ 6629488 (+)
G1209548 NA non-coding upstream 9099 6620285 ~ 6620498 (+)
G1209544 NA non-coding upstream 12808 6616546 ~ 6616789 (+)
G1209492 NA non-coding upstream 117456 6506045 ~ 6512141 (+)
G1209491 NA non-coding upstream 118828 6503876 ~ 6510769 (+)
G1209601 NA non-coding downstream 76803 6706941 ~ 6707154 (+)
G1209602 NA non-coding downstream 77304 6707442 ~ 6707664 (+)
G1209608 NA non-coding downstream 87542 6717680 ~ 6717892 (+)
G1209616 NA non-coding downstream 114814 6744952 ~ 6745618 (+)
G1209617 NA non-coding downstream 116155 6746293 ~ 6746521 (+)
G1208884 NA other upstream 721828 5903921 ~ 5907769 (+)
G1207553 NA other upstream 1707037 4922141 ~ 4922560 (+)
LOC110488581 LOC106611927 other upstream 2235557 4327546 ~ 4477610 (+)
G1205631 LOC106611372 other upstream 3454367 3174502 ~ 3175230 (+)
LOC110488551 LOC106604955 other upstream 3476864 2837214 ~ 3160873 (+)
G1209615 LOC106604863 other downstream 113796 6743934 ~ 6744790 (+)
G1209622 NA other downstream 121214 6751352 ~ 6751714 (+)
G1209572 NA other downstream 122819 6752864 ~ 6756811 (+)
LOC110488661 diaph1 other downstream 688882 7251365 ~ 7385487 (+)
G1210502 NA other downstream 802239 7432377 ~ 7435168 (+)

Expression


Co-expression Network