G1209619


Basic Information

Item Value
gene id G1209619
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048578.1
NCBI id CM023232.3
chromosome length 43310081
location 6748780 ~ 6749049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1381372
CTAGACTGGGCTTTGGCGTCTCCAGACTTGGcgctctcctccagctcctccacactCAGCTCCTCCTCTGGCTCCTCTACGTAGAGACAACAGTCATCTGATTGATGTATTCATTTCTTAGGAAGGTTACTGCCAAAGGGGATATTACATGGTGACTGGCAGCattgatacacacagaaacatgtgCCGCATAGCATTTGGGAACAAGCATACACCTAATGAACTGTAGTGTTATTCATTATGAACAGGATGTTCCATCCTGTAGACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1381372 True 270 lncRNA 0.47 1 6748780 6749049

Neighbor

gene id symbol gene type direction distance location
LOC110487700 LOC106604865 coding upstream 7858 6718527 ~ 6740922 (+)
LOC110488643 LOC106604862 coding upstream 37642 6707877 ~ 6711138 (+)
LOC110488638 LOC106604859 coding upstream 45582 6699386 ~ 6703198 (+)
LOC110488640 LOC106604860 coding upstream 49808 6688174 ~ 6698972 (+)
LOC110488641 LOC106604858 coding upstream 60738 6685129 ~ 6688042 (+)
LOC110488646 LOC106604864 coding downstream 16115 6765164 ~ 6810082 (+)
LOC110488650 LOC106611908 coding downstream 96171 6845220 ~ 6886525 (+)
dock2 LOC106604826 coding downstream 184011 6933060 ~ 6937910 (+)
LOC110488657 LOC106604826 coding downstream 191361 6940410 ~ 7081993 (+)
LOC118938692 LOC106611811 coding downstream 334134 7083183 ~ 7087463 (+)
G1209618 LOC106604863 non-coding upstream 1297 6746812 ~ 6747483 (+)
G1209617 NA non-coding upstream 2259 6746293 ~ 6746521 (+)
G1209616 NA non-coding upstream 3162 6744952 ~ 6745618 (+)
G1209608 NA non-coding upstream 30888 6717680 ~ 6717892 (+)
G1209602 NA non-coding upstream 41116 6707442 ~ 6707664 (+)
G1209621 NA non-coding downstream 1047 6750096 ~ 6750315 (+)
G1209572 NA non-coding downstream 3815 6752864 ~ 6756811 (+)
G1209573 NA non-coding downstream 62044 6811093 ~ 6811587 (+)
G1209639 NA non-coding downstream 63022 6812071 ~ 6812426 (+)
G1209645 NA non-coding downstream 67275 6816324 ~ 6816563 (+)
G1209615 LOC106604863 other upstream 3990 6743934 ~ 6744790 (+)
G1208884 NA other upstream 841011 5903921 ~ 5907769 (+)
G1207553 NA other upstream 1826220 4922141 ~ 4922560 (+)
LOC110488581 LOC106611927 other upstream 2354740 4327546 ~ 4477610 (+)
G1205631 LOC106611372 other upstream 3573550 3174502 ~ 3175230 (+)
G1209622 NA other downstream 2303 6751352 ~ 6751714 (+)
LOC110488661 diaph1 other downstream 569971 7251365 ~ 7385487 (+)
G1210502 NA other downstream 683328 7432377 ~ 7435168 (+)
G1210520 LOC106604879 other downstream 710799 7459848 ~ 7481225 (+)

Expression


Co-expression Network